Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ZNF428Q96B54 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ZNF428Q96B54 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
ZNF428Q96B54 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ZNF428Q96B54 KRT8P17-201ENST00000453110 1448 ntBASIC25.84■■□□□ 1.73
ZNF428Q96B54 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ZNF428Q96B54 AL031963.3-201ENST00000606441 850 ntBASIC25.84■■□□□ 1.73
ZNF428Q96B54 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC25.84■■□□□ 1.73
ZNF428Q96B54 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
ZNF428Q96B54 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.84■■□□□ 1.73
ZNF428Q96B54 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.84■■□□□ 1.73
ZNF428Q96B54 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
ZNF428Q96B54 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ZNF428Q96B54 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZNF428Q96B54 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC25.83■■□□□ 1.73
ZNF428Q96B54 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ZNF428Q96B54 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZNF428Q96B54 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZNF428Q96B54 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZNF428Q96B54 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
ZNF428Q96B54 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC25.83■■□□□ 1.73
ZNF428Q96B54 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZNF428Q96B54 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
ZNF428Q96B54 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.72
ZNF428Q96B54 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
ZNF428Q96B54 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
ZNF428Q96B54 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC25.82■■□□□ 1.72
ZNF428Q96B54 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ZNF428Q96B54 KRT8P20-201ENST00000423953 1409 ntBASIC25.82■■□□□ 1.72
ZNF428Q96B54 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
ZNF428Q96B54 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ZNF428Q96B54 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZNF428Q96B54 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZNF428Q96B54 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC25.82■■□□□ 1.72
ZNF428Q96B54 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC25.82■■□□□ 1.72
ZNF428Q96B54 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC25.82■■□□□ 1.72
ZNF428Q96B54 HLA-B-256ENST00000639848 1089 ntBASIC25.82■■□□□ 1.72
ZNF428Q96B54 CD37-204ENST00000535669 1674 ntTSL 2 BASIC25.82■■□□□ 1.72
ZNF428Q96B54 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZNF428Q96B54 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZNF428Q96B54 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC25.82■■□□□ 1.72
ZNF428Q96B54 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
ZNF428Q96B54 CRK-204ENST00000574295 1391 ntTSL 5 BASIC25.82■■□□□ 1.72
ZNF428Q96B54 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF428Q96B54 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF428Q96B54 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF428Q96B54 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF428Q96B54 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF428Q96B54 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC25.81■■□□□ 1.72
ZNF428Q96B54 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF428Q96B54 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.81■■□□□ 1.72
ZNF428Q96B54 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
ZNF428Q96B54 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.81■■□□□ 1.72
ZNF428Q96B54 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF428Q96B54 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC25.81■■□□□ 1.72
ZNF428Q96B54 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF428Q96B54 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF428Q96B54 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
ZNF428Q96B54 BX119927.1-201ENST00000636596 1552 ntBASIC25.81■■□□□ 1.72
ZNF428Q96B54 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF428Q96B54 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.81■■□□□ 1.72
ZNF428Q96B54 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF428Q96B54 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF428Q96B54 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF428Q96B54 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
ZNF428Q96B54 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC25.8■■□□□ 1.72
ZNF428Q96B54 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.8■■□□□ 1.72
ZNF428Q96B54 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF428Q96B54 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF428Q96B54 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF428Q96B54 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF428Q96B54 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC25.8■■□□□ 1.72
ZNF428Q96B54 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.8■■□□□ 1.72
ZNF428Q96B54 REXO2-208ENST00000539754 791 ntTSL 2 BASIC25.8■■□□□ 1.72
ZNF428Q96B54 IRX5-204ENST00000560154 879 ntTSL 5 BASIC25.8■■□□□ 1.72
ZNF428Q96B54 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC25.8■■□□□ 1.72
ZNF428Q96B54 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF428Q96B54 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF428Q96B54 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF428Q96B54 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC25.8■■□□□ 1.72
ZNF428Q96B54 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF428Q96B54 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC25.8■■□□□ 1.72
ZNF428Q96B54 USP39-204ENST00000409766 2033 ntTSL 2 BASIC25.8■■□□□ 1.72
ZNF428Q96B54 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.8■■□□□ 1.72
ZNF428Q96B54 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZNF428Q96B54 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZNF428Q96B54 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ZNF428Q96B54 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ZNF428Q96B54 MOK-233ENST00000524214 1539 ntTSL 2 BASIC25.79■■□□□ 1.72
ZNF428Q96B54 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZNF428Q96B54 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZNF428Q96B54 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZNF428Q96B54 HLA-G-202ENST00000376815 851 ntBASIC25.79■■□□□ 1.72
ZNF428Q96B54 HLA-G-203ENST00000376818 1127 ntBASIC25.79■■□□□ 1.72
ZNF428Q96B54 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ZNF428Q96B54 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.79■■□□□ 1.72
ZNF428Q96B54 UNC93B4-201ENST00000505679 747 ntBASIC25.79■■□□□ 1.72
ZNF428Q96B54 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZNF428Q96B54 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC25.79■■□□□ 1.72
ZNF428Q96B54 AC006557.6-201ENST00000623071 864 ntBASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms