Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RPGRQ92834 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RPGRQ92834 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
RPGRQ92834 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RPGRQ92834 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RPGRQ92834 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RPGRQ92834 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RPGRQ92834 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RPGRQ92834 LINC01568-207ENST00000641790 1380 ntBASIC24.84■■□□□ 1.57
RPGRQ92834 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
RPGRQ92834 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RPGRQ92834 AC005521.1-201ENST00000393351 872 ntBASIC24.84■■□□□ 1.57
RPGRQ92834 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RPGRQ92834 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC24.84■■□□□ 1.57
RPGRQ92834 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.84■■□□□ 1.57
RPGRQ92834 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
RPGRQ92834 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC24.84■■□□□ 1.57
RPGRQ92834 P4HB-223ENST00000576390 439 ntTSL 4 BASIC24.84■■□□□ 1.57
RPGRQ92834 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RPGRQ92834 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RPGRQ92834 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RPGRQ92834 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RPGRQ92834 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RPGRQ92834 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RPGRQ92834 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RPGRQ92834 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.83■■□□□ 1.57
RPGRQ92834 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.83■■□□□ 1.57
RPGRQ92834 PTBP1P-201ENST00000554374 1601 ntBASIC24.83■■□□□ 1.57
RPGRQ92834 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RPGRQ92834 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.83■■□□□ 1.57
RPGRQ92834 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RPGRQ92834 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RPGRQ92834 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RPGRQ92834 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC24.83■■□□□ 1.57
RPGRQ92834 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC24.83■■□□□ 1.57
RPGRQ92834 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC24.83■■□□□ 1.57
RPGRQ92834 KSR1P1-201ENST00000446298 240 ntBASIC24.83■■□□□ 1.57
RPGRQ92834 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC24.83■■□□□ 1.57
RPGRQ92834 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.83■■□□□ 1.57
RPGRQ92834 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC24.83■■□□□ 1.57
RPGRQ92834 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.83■■□□□ 1.57
RPGRQ92834 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.83■■□□□ 1.57
RPGRQ92834 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.83■■□□□ 1.57
RPGRQ92834 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.83■■□□□ 1.57
RPGRQ92834 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.83■■□□□ 1.56
RPGRQ92834 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RPGRQ92834 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
RPGRQ92834 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RPGRQ92834 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
RPGRQ92834 NIFKP9-201ENST00000419265 221 ntBASIC24.82■■□□□ 1.56
RPGRQ92834 KRT8P20-201ENST00000423953 1409 ntBASIC24.82■■□□□ 1.56
RPGRQ92834 AL390955.1-201ENST00000428694 934 ntBASIC24.82■■□□□ 1.56
RPGRQ92834 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC24.82■■□□□ 1.56
RPGRQ92834 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.82■■□□□ 1.56
RPGRQ92834 NAPSB-206ENST00000562112 1266 ntBASIC24.82■■□□□ 1.56
RPGRQ92834 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.82■■□□□ 1.56
RPGRQ92834 AL590326.2-201ENST00000625139 305 ntBASIC24.82■■□□□ 1.56
RPGRQ92834 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
RPGRQ92834 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
RPGRQ92834 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.82■■□□□ 1.56
RPGRQ92834 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
RPGRQ92834 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
RPGRQ92834 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RPGRQ92834 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RPGRQ92834 KRT16P1-201ENST00000399124 1418 ntBASIC24.81■■□□□ 1.56
RPGRQ92834 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RPGRQ92834 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RPGRQ92834 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.81■■□□□ 1.56
RPGRQ92834 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC24.81■■□□□ 1.56
RPGRQ92834 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RPGRQ92834 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC24.81■■□□□ 1.56
RPGRQ92834 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RPGRQ92834 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.81■■□□□ 1.56
RPGRQ92834 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RPGRQ92834 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RPGRQ92834 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.81■■□□□ 1.56
RPGRQ92834 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RPGRQ92834 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RPGRQ92834 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RPGRQ92834 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.8■■□□□ 1.56
RPGRQ92834 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.8■■□□□ 1.56
RPGRQ92834 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC24.8■■□□□ 1.56
RPGRQ92834 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.8■■□□□ 1.56
RPGRQ92834 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.8■■□□□ 1.56
RPGRQ92834 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.8■■□□□ 1.56
RPGRQ92834 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.8■■□□□ 1.56
RPGRQ92834 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.8■■□□□ 1.56
RPGRQ92834 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RPGRQ92834 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RPGRQ92834 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RPGRQ92834 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RPGRQ92834 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
RPGRQ92834 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RPGRQ92834 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RPGRQ92834 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.79■■□□□ 1.56
RPGRQ92834 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RPGRQ92834 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.79■■□□□ 1.56
RPGRQ92834 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RPGRQ92834 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RPGRQ92834 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms