Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CASKIN1Q8WXD9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC31.42■■■□□ 2.62
CASKIN1Q8WXD9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CASKIN1Q8WXD9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC31.42■■■□□ 2.62
CASKIN1Q8WXD9 AP003071.4-201ENST00000562276 1284 ntBASIC31.42■■■□□ 2.62
CASKIN1Q8WXD9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
CASKIN1Q8WXD9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
CASKIN1Q8WXD9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC31.42■■■□□ 2.62
CASKIN1Q8WXD9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CASKIN1Q8WXD9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
CASKIN1Q8WXD9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
CASKIN1Q8WXD9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CASKIN1Q8WXD9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CASKIN1Q8WXD9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CASKIN1Q8WXD9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC31.41■■■□□ 2.62
CASKIN1Q8WXD9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CASKIN1Q8WXD9 AC006128.1-201ENST00000624704 1661 ntBASIC31.41■■■□□ 2.62
CASKIN1Q8WXD9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
CASKIN1Q8WXD9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC31.41■■■□□ 2.62
CASKIN1Q8WXD9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC31.41■■■□□ 2.62
CASKIN1Q8WXD9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
CASKIN1Q8WXD9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CASKIN1Q8WXD9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CASKIN1Q8WXD9 KRT8P17-201ENST00000453110 1448 ntBASIC31.41■■■□□ 2.62
CASKIN1Q8WXD9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CASKIN1Q8WXD9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC31.41■■■□□ 2.62
CASKIN1Q8WXD9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 FAM210CP-201ENST00000445714 574 ntBASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CASKIN1Q8WXD9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC31.39■■■□□ 2.62
CASKIN1Q8WXD9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CASKIN1Q8WXD9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC31.39■■■□□ 2.62
CASKIN1Q8WXD9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
CASKIN1Q8WXD9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC31.39■■■□□ 2.62
CASKIN1Q8WXD9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CASKIN1Q8WXD9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC31.39■■■□□ 2.62
CASKIN1Q8WXD9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
CASKIN1Q8WXD9 NUDT16P1-203ENST00000513809 620 ntBASIC31.39■■■□□ 2.62
CASKIN1Q8WXD9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC31.39■■■□□ 2.62
CASKIN1Q8WXD9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC31.39■■■□□ 2.62
CASKIN1Q8WXD9 AC079834.2-201ENST00000609776 1949 ntBASIC31.39■■■□□ 2.61
CASKIN1Q8WXD9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CASKIN1Q8WXD9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC31.38■■■□□ 2.61
CASKIN1Q8WXD9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC31.38■■■□□ 2.61
CASKIN1Q8WXD9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CASKIN1Q8WXD9 FAM197Y1-201ENST00000421178 764 ntBASIC31.38■■■□□ 2.61
CASKIN1Q8WXD9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC31.38■■■□□ 2.61
CASKIN1Q8WXD9 AC073195.1-201ENST00000607241 877 ntBASIC31.38■■■□□ 2.61
CASKIN1Q8WXD9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC31.38■■■□□ 2.61
CASKIN1Q8WXD9 BID-203ENST00000399765 1879 ntTSL 2 BASIC31.38■■■□□ 2.61
CASKIN1Q8WXD9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC31.38■■■□□ 2.61
CASKIN1Q8WXD9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 AC026310.3-201ENST00000625186 2373 ntBASIC31.37■■■□□ 2.61
CASKIN1Q8WXD9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
CASKIN1Q8WXD9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CASKIN1Q8WXD9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
CASKIN1Q8WXD9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CASKIN1Q8WXD9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CASKIN1Q8WXD9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.36■■■□□ 2.61
CASKIN1Q8WXD9 NIFKP9-201ENST00000419265 221 ntBASIC31.36■■■□□ 2.61
CASKIN1Q8WXD9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.36■■■□□ 2.61
CASKIN1Q8WXD9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC31.36■■■□□ 2.61
CASKIN1Q8WXD9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.36■■■□□ 2.61
CASKIN1Q8WXD9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC31.36■■■□□ 2.61
CASKIN1Q8WXD9 AC004264.1-201ENST00000608354 794 ntBASIC31.36■■■□□ 2.61
CASKIN1Q8WXD9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC31.36■■■□□ 2.61
CASKIN1Q8WXD9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC31.35■■■□□ 2.61
CASKIN1Q8WXD9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CASKIN1Q8WXD9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CASKIN1Q8WXD9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CASKIN1Q8WXD9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC31.35■■■□□ 2.61
CASKIN1Q8WXD9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CASKIN1Q8WXD9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC31.35■■■□□ 2.61
CASKIN1Q8WXD9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms