Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 DPP3P2-201ENST00000416030 1696 ntBASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 EDA-201ENST00000338901 1233 ntBASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 AF213884.3-201ENST00000563833 479 ntBASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 AL355001.2-201ENST00000620617 1191 ntBASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 AC105233.4-201ENST00000642045 216 ntBASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD2Q8NHY2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 AP001330.3-201ENST00000520123 633 ntBASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 AC027682.1-201ENST00000562846 899 ntBASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD2Q8NHY2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 BX119927.1-201ENST00000636596 1552 ntBASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFWD2Q8NHY2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFWD2Q8NHY2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.77■□□□□ 0.76
RFWD2Q8NHY2 Z82202.1-201ENST00000623446 1880 ntBASIC19.77■□□□□ 0.76
RFWD2Q8NHY2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.77■□□□□ 0.76
RFWD2Q8NHY2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFWD2Q8NHY2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFWD2Q8NHY2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RFWD2Q8NHY2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RFWD2Q8NHY2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.77■□□□□ 0.76
RFWD2Q8NHY2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.77■□□□□ 0.76
RFWD2Q8NHY2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.77■□□□□ 0.76
RFWD2Q8NHY2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RFWD2Q8NHY2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFWD2Q8NHY2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFWD2Q8NHY2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFWD2Q8NHY2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFWD2Q8NHY2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.77■□□□□ 0.75
RFWD2Q8NHY2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 TSPY26P-201ENST00000476365 1326 ntBASIC19.76■□□□□ 0.75
RFWD2Q8NHY2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms