Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.86■■□□□ 1.41
CTR9Q6PD62 AL359736.2-201ENST00000621992 437 ntBASIC23.86■■□□□ 1.41
CTR9Q6PD62 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CTR9Q6PD62 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.86■■□□□ 1.41
CTR9Q6PD62 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CTR9Q6PD62 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTR9Q6PD62 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.85■■□□□ 1.41
CTR9Q6PD62 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.85■■□□□ 1.41
CTR9Q6PD62 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
CTR9Q6PD62 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CTR9Q6PD62 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.85■■□□□ 1.41
CTR9Q6PD62 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CTR9Q6PD62 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CTR9Q6PD62 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.85■■□□□ 1.41
CTR9Q6PD62 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.85■■□□□ 1.41
CTR9Q6PD62 MTDHP1-201ENST00000605323 784 ntBASIC23.85■■□□□ 1.41
CTR9Q6PD62 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CTR9Q6PD62 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CTR9Q6PD62 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CTR9Q6PD62 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTR9Q6PD62 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.84■■□□□ 1.41
CTR9Q6PD62 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.84■■□□□ 1.41
CTR9Q6PD62 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CTR9Q6PD62 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
CTR9Q6PD62 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CTR9Q6PD62 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTR9Q6PD62 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CTR9Q6PD62 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.84■■□□□ 1.41
CTR9Q6PD62 RPPH1-201ENST00000516869 333 ntBASIC23.84■■□□□ 1.41
CTR9Q6PD62 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.84■■□□□ 1.41
CTR9Q6PD62 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTR9Q6PD62 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CTR9Q6PD62 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CTR9Q6PD62 AC124283.5-201ENST00000624661 1809 ntBASIC23.84■■□□□ 1.41
CTR9Q6PD62 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CTR9Q6PD62 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.83■■□□□ 1.41
CTR9Q6PD62 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.83■■□□□ 1.41
CTR9Q6PD62 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CTR9Q6PD62 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CTR9Q6PD62 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CTR9Q6PD62 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CTR9Q6PD62 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.83■■□□□ 1.41
CTR9Q6PD62 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
CTR9Q6PD62 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.83■■□□□ 1.41
CTR9Q6PD62 C1QBPP2-201ENST00000528754 825 ntBASIC23.83■■□□□ 1.41
CTR9Q6PD62 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.83■■□□□ 1.41
CTR9Q6PD62 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.83■■□□□ 1.41
CTR9Q6PD62 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CTR9Q6PD62 AL031963.3-201ENST00000606441 850 ntBASIC23.83■■□□□ 1.41
CTR9Q6PD62 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.83■■□□□ 1.41
CTR9Q6PD62 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.83■■□□□ 1.41
CTR9Q6PD62 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CTR9Q6PD62 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CTR9Q6PD62 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
CTR9Q6PD62 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CTR9Q6PD62 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.83■■□□□ 1.4
CTR9Q6PD62 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTR9Q6PD62 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTR9Q6PD62 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CTR9Q6PD62 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.82■■□□□ 1.4
CTR9Q6PD62 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CTR9Q6PD62 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
CTR9Q6PD62 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CTR9Q6PD62 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTR9Q6PD62 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTR9Q6PD62 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTR9Q6PD62 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.82■■□□□ 1.4
CTR9Q6PD62 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.82■■□□□ 1.4
CTR9Q6PD62 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.82■■□□□ 1.4
CTR9Q6PD62 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.82■■□□□ 1.4
CTR9Q6PD62 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CTR9Q6PD62 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CTR9Q6PD62 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTR9Q6PD62 KRT8P17-201ENST00000453110 1448 ntBASIC23.82■■□□□ 1.4
CTR9Q6PD62 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CTR9Q6PD62 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTR9Q6PD62 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CTR9Q6PD62 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTR9Q6PD62 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTR9Q6PD62 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTR9Q6PD62 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.81■■□□□ 1.4
CTR9Q6PD62 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.81■■□□□ 1.4
CTR9Q6PD62 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTR9Q6PD62 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.81■■□□□ 1.4
CTR9Q6PD62 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.81■■□□□ 1.4
CTR9Q6PD62 KRT8P20-201ENST00000423953 1409 ntBASIC23.81■■□□□ 1.4
CTR9Q6PD62 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CTR9Q6PD62 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
CTR9Q6PD62 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
CTR9Q6PD62 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CTR9Q6PD62 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CTR9Q6PD62 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTR9Q6PD62 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTR9Q6PD62 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.8■■□□□ 1.4
CTR9Q6PD62 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTR9Q6PD62 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CTR9Q6PD62 HLA-G-202ENST00000376815 851 ntBASIC23.8■■□□□ 1.4
CTR9Q6PD62 HLA-G-203ENST00000376818 1127 ntBASIC23.8■■□□□ 1.4
CTR9Q6PD62 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.8■■□□□ 1.4
CTR9Q6PD62 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms