Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 AC093787.1-201ENST00000450396 207 ntBASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 AC105036.2-201ENST00000569468 176 ntBASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.4■□□□□ 0.7
HIST2H2AA3Q6FI13 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
HIST2H2AA3Q6FI13 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 MIR663A-201ENST00000385250 93 ntBASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 LSM12P1-201ENST00000411836 588 ntBASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIST2H2AA3Q6FI13 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 MKRN4P-201ENST00000444706 1521 ntBASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 AC006970.2-201ENST00000450065 779 ntBASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST2H2AA3Q6FI13 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 AC099778.1-201ENST00000568593 1911 ntBASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 RAP2CP1-201ENST00000605103 478 ntBASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 AC092666.2-201ENST00000613287 246 ntBASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST2H2AA3Q6FI13 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST2H2AA3Q6FI13 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms