Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 AC112907.3-201ENST00000577781 2400 ntBASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRICKLE4Q2TBC4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PRICKLE4Q2TBC4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.71■□□□□ 0.58
PRICKLE4Q2TBC4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 HLA-G-202ENST00000376815 851 ntBASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 HLA-G-203ENST00000376818 1127 ntBASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.7■□□□□ 0.58
PRICKLE4Q2TBC4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 TCF3P1-201ENST00000423021 1937 ntBASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE4Q2TBC4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 HLA-B-256ENST00000639848 1089 ntBASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE4Q2TBC4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms