Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SF3A2Q15428 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SF3A2Q15428 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SF3A2Q15428 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SF3A2Q15428 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SF3A2Q15428 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SF3A2Q15428 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SF3A2Q15428 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.91■□□□□ 0.78
SF3A2Q15428 AP002982.1-201ENST00000492365 877 ntBASIC19.91■□□□□ 0.78
SF3A2Q15428 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.91■□□□□ 0.78
SF3A2Q15428 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
SF3A2Q15428 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SF3A2Q15428 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SF3A2Q15428 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SF3A2Q15428 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SF3A2Q15428 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SF3A2Q15428 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SF3A2Q15428 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.91■□□□□ 0.78
SF3A2Q15428 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SF3A2Q15428 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SF3A2Q15428 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.9■□□□□ 0.78
SF3A2Q15428 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.9■□□□□ 0.78
SF3A2Q15428 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SF3A2Q15428 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.9■□□□□ 0.78
SF3A2Q15428 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.9■□□□□ 0.78
SF3A2Q15428 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.9■□□□□ 0.78
SF3A2Q15428 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SF3A2Q15428 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SF3A2Q15428 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SF3A2Q15428 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.9■□□□□ 0.78
SF3A2Q15428 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.9■□□□□ 0.78
SF3A2Q15428 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SF3A2Q15428 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SF3A2Q15428 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SF3A2Q15428 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SF3A2Q15428 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SF3A2Q15428 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SF3A2Q15428 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.89■□□□□ 0.77
SF3A2Q15428 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SF3A2Q15428 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SF3A2Q15428 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SF3A2Q15428 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.89■□□□□ 0.77
SF3A2Q15428 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.89■□□□□ 0.77
SF3A2Q15428 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.89■□□□□ 0.77
SF3A2Q15428 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SF3A2Q15428 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.89■□□□□ 0.77
SF3A2Q15428 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SF3A2Q15428 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SF3A2Q15428 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SF3A2Q15428 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.88■□□□□ 0.77
SF3A2Q15428 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SF3A2Q15428 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.88■□□□□ 0.77
SF3A2Q15428 FITM1-202ENST00000559294 800 ntBASIC19.88■□□□□ 0.77
SF3A2Q15428 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SF3A2Q15428 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SF3A2Q15428 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SF3A2Q15428 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SF3A2Q15428 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.87■□□□□ 0.77
SF3A2Q15428 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.87■□□□□ 0.77
SF3A2Q15428 AC010203.1-204ENST00000548782 407 ntBASIC19.87■□□□□ 0.77
SF3A2Q15428 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.87■□□□□ 0.77
SF3A2Q15428 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SF3A2Q15428 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.87■□□□□ 0.77
SF3A2Q15428 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 SLC25A24-204ENST00000569674 2357 ntBASIC19.87■□□□□ 0.77
SF3A2Q15428 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SF3A2Q15428 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.86■□□□□ 0.77
SF3A2Q15428 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.86■□□□□ 0.77
SF3A2Q15428 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SF3A2Q15428 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.86■□□□□ 0.77
SF3A2Q15428 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SF3A2Q15428 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3A2Q15428 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.86■□□□□ 0.77
SF3A2Q15428 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.86■□□□□ 0.77
SF3A2Q15428 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.86■□□□□ 0.77
SF3A2Q15428 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3A2Q15428 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SF3A2Q15428 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SF3A2Q15428 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SF3A2Q15428 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.85■□□□□ 0.77
SF3A2Q15428 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SF3A2Q15428 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SF3A2Q15428 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.85■□□□□ 0.77
SF3A2Q15428 FAM99A-202ENST00000538190 1989 ntBASIC19.85■□□□□ 0.77
SF3A2Q15428 AC080038.3-201ENST00000623346 1952 ntBASIC19.85■□□□□ 0.77
SF3A2Q15428 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms