Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 SNU56YDR240C 1479 nt-1.76□□□□□ -2.69
VPS13Q07878 SPO74YGL170C 1242 nt-1.77□□□□□ -2.69
VPS13Q07878 RRT1YBL048W 312 nt-1.77□□□□□ -2.69
VPS13Q07878 YER084W-AYER084W-A 513 nt-1.77□□□□□ -2.69
VPS13Q07878 ATG31YDR022C 591 nt-1.77□□□□□ -2.69
VPS13Q07878 GPX1YKL026C 504 nt-1.78□□□□□ -2.69
VPS13Q07878 YBL029WYBL029W 1131 nt-1.79□□□□□ -2.7
VPS13Q07878 YOL118CYOL118C 309 nt-1.79□□□□□ -2.7
VPS13Q07878 YMR158C-AYMR158C-A 138 nt-1.8□□□□□ -2.7
VPS13Q07878 LRP1YHR081W 555 nt-1.81□□□□□ -2.7
VPS13Q07878 BER1YLR412W 825 nt-1.81□□□□□ -2.7
VPS13Q07878 YJL020W-AYJL020W-A 258 nt-1.82□□□□□ -2.7
VPS13Q07878 YNL067W-AYNL067W-A 147 nt-1.82□□□□□ -2.7
VPS13Q07878 PAN3YKL025C 2040 nt-1.83□□□□□ -2.7
VPS13Q07878 YDR182W-AYDR182W-A 204 nt-1.83□□□□□ -2.7
VPS13Q07878 YGL182CYGL182C 324 nt-1.84□□□□□ -2.7
VPS13Q07878 YBR099CYBR099C 384 nt-1.84□□□□□ -2.7
VPS13Q07878 YHL041WYHL041W 450 nt-1.84□□□□□ -2.7
VPS13Q07878 YIL002W-AYIL002W-A 210 nt-1.84□□□□□ -2.7
VPS13Q07878 YHR130CYHR130C 336 nt-1.85□□□□□ -2.71
VPS13Q07878 PAA1YDR071C 576 nt-1.85□□□□□ -2.71
VPS13Q07878 NTC20YBR188C 423 nt-1.86□□□□□ -2.71
VPS13Q07878 TCA17YEL048C 459 nt-1.86□□□□□ -2.71
VPS13Q07878 YLL006W-AYLL006W-A 177 nt-1.86□□□□□ -2.71
VPS13Q07878 YNL144W-AYNL144W-A 84 nt-1.86□□□□□ -2.71
VPS13Q07878 RPS10AYOR293W 318 nt-1.87□□□□□ -2.71
VPS13Q07878 YFR012W-AYFR012W-A 87 nt-1.87□□□□□ -2.71
VPS13Q07878 SUS1YBR111W-A 291 nt-1.87□□□□□ -2.71
VPS13Q07878 GIC2YDR309C 1152 nt-1.88□□□□□ -2.71
VPS13Q07878 YGR114CYGR114C 390 nt-1.88□□□□□ -2.71
VPS13Q07878 ACF4YJR083C 930 nt-1.88□□□□□ -2.71
VPS13Q07878 SDH7YDR511W 402 nt-1.88□□□□□ -2.71
VPS13Q07878 MFA2YNL145W 117 nt-1.88□□□□□ -2.71
VPS13Q07878 BET5YML077W 480 nt-1.89□□□□□ -2.71
VPS13Q07878 MED11YMR112C 396 nt-1.89□□□□□ -2.71
VPS13Q07878 SHE3YBR130C 1278 nt-1.89□□□□□ -2.71
VPS13Q07878 tN(GUU)QtN(GUU)Q 71 nt-1.91□□□□□ -2.72
VPS13Q07878 YNL089CYNL089C 477 nt-1.91□□□□□ -2.72
VPS13Q07878 RPL42BYHR141C 321 nt-1.91□□□□□ -2.72
VPS13Q07878 YML100W-AYML100W-A 174 nt-1.91□□□□□ -2.72
VPS13Q07878 YMR153C-AYMR153C-A 336 nt-1.92□□□□□ -2.72
VPS13Q07878 YPR016W-AYPR016W-A 261 nt-1.92□□□□□ -2.72
VPS13Q07878 YPR142CYPR142C 564 nt-1.92□□□□□ -2.72
VPS13Q07878 YER076W-AYER076W-A 348 nt-1.93□□□□□ -2.72
VPS13Q07878 YFR010W-AYFR010W-A 189 nt-1.93□□□□□ -2.72
VPS13Q07878 AEP1YMR064W 1557 nt-1.94□□□□□ -2.72
VPS13Q07878 YOL029CYOL029C 606 nt-1.95□□□□□ -2.72
VPS13Q07878 COX8YLR395C 237 nt-1.96□□□□□ -2.72
VPS13Q07878 ATX1YNL259C 222 nt-1.96□□□□□ -2.72
VPS13Q07878 YDR524C-AYDR524C-A 120 nt-1.97□□□□□ -2.72
VPS13Q07878 YFR057WYFR057W 456 nt-1.97□□□□□ -2.72
VPS13Q07878 YIR021W-AYIR021W-A 213 nt-1.97□□□□□ -2.72
VPS13Q07878 YER135CYER135C 393 nt-1.97□□□□□ -2.73
VPS13Q07878 TAN1YGL232W 870 nt-1.98□□□□□ -2.73
VPS13Q07878 snR81snR81 201 nt-1.99□□□□□ -2.73
VPS13Q07878 YKL065W-AYKL065W-A 222 nt-1.99□□□□□ -2.73
VPS13Q07878 YBR064WYBR064W 429 nt-2□□□□□ -2.73
VPS13Q07878 YLR154W-FYLR154W-F 141 nt-2□□□□□ -2.73
VPS13Q07878 YLR198CYLR198C 360 nt-2.01□□□□□ -2.73
VPS13Q07878 YDL009CYDL009C 324 nt-2.02□□□□□ -2.73
VPS13Q07878 YDR199WYDR199W 366 nt-2.03□□□□□ -2.73
VPS13Q07878 YHL046W-AYHL046W-A 327 nt-2.04□□□□□ -2.74
VPS13Q07878 snR68snR68 136 nt-2.04□□□□□ -2.74
VPS13Q07878 YER158W-AYER158W-A 216 nt-2.04□□□□□ -2.74
VPS13Q07878 THG1YGR024C 714 nt-2.06□□□□□ -2.74
VPS13Q07878 RPS20YHL015W 366 nt-2.06□□□□□ -2.74
VPS13Q07878 YOR366WYOR366W 354 nt-2.06□□□□□ -2.74
VPS13Q07878 SCEIQ0160 708 nt-2.06□□□□□ -2.74
VPS13Q07878 snR49snR49 165 nt-2.07□□□□□ -2.74
VPS13Q07878 FAR3YMR052W 615 nt-2.07□□□□□ -2.74
VPS13Q07878 snR189snR189 189 nt-2.08□□□□□ -2.74
VPS13Q07878 YDL152WYDL152W 366 nt-2.1□□□□□ -2.75
VPS13Q07878 IST3YIR005W 447 nt-2.1□□□□□ -2.75
VPS13Q07878 MVB12YGR206W 306 nt-2.11□□□□□ -2.75
VPS13Q07878 YLR271WYLR271W 825 nt-2.11□□□□□ -2.75
VPS13Q07878 YHL012WYHL012W 1482 nt-2.12□□□□□ -2.75
VPS13Q07878 YDR194W-AYDR194W-A 153 nt-2.13□□□□□ -2.75
VPS13Q07878 ATP15YPL271W 189 nt-2.13□□□□□ -2.75
VPS13Q07878 YHR028W-AYHR028W-A 321 nt-2.14□□□□□ -2.75
VPS13Q07878 YGL015CYGL015C 393 nt-2.15□□□□□ -2.75
VPS13Q07878 COX7YMR256C 183 nt-2.15□□□□□ -2.75
VPS13Q07878 snR74snR74 88 nt-2.16□□□□□ -2.75
VPS13Q07878 TDA2YER071C 381 nt-2.16□□□□□ -2.76
VPS13Q07878 YMR290W-AYMR290W-A 348 nt-2.17□□□□□ -2.76
VPS13Q07878 snR77snR77 88 nt-2.17□□□□□ -2.76
VPS13Q07878 LOC1YFR001W 615 nt-2.19□□□□□ -2.76
VPS13Q07878 YMR307C-AYMR307C-A 195 nt-2.19□□□□□ -2.76
VPS13Q07878 YBR285WYBR285W 435 nt-2.19□□□□□ -2.76
VPS13Q07878 GOS1YHL031C 672 nt-2.2□□□□□ -2.76
VPS13Q07878 YKL044WYKL044W 321 nt-2.2□□□□□ -2.76
VPS13Q07878 YHR125WYHR125W 306 nt-2.21□□□□□ -2.76
VPS13Q07878 RUB1YDR139C 234 nt-2.21□□□□□ -2.76
VPS13Q07878 SRB7YDR308C 423 nt-2.21□□□□□ -2.76
VPS13Q07878 PBI2YNL015W 228 nt-2.21□□□□□ -2.76
VPS13Q07878 YAP6YDR259C 1152 nt-2.22□□□□□ -2.76
VPS13Q07878 YPL119C-AYPL119C-A 264 nt-2.23□□□□□ -2.77
VPS13Q07878 CDC65tQ(CUG)M 72 nt-2.23□□□□□ -2.77
VPS13Q07878 YKL068W-AYKL068W-A 237 nt-2.24□□□□□ -2.77
VPS13Q07878 YKE2YLR200W 345 nt-2.24□□□□□ -2.77
VPS13Q07878 YPR010C-AYPR010C-A 219 nt-2.24□□□□□ -2.77
Retrieved 100 of 7,029 protein–RNA pairs in 71.1 ms