Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.34■□□□□ 0.69
CLDN6P56747 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN6P56747 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN6P56747 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN6P56747 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN6P56747 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN6P56747 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN6P56747 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN6P56747 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN6P56747 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CLDN6P56747 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN6P56747 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN6P56747 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN6P56747 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN6P56747 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN6P56747 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN6P56747 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN6P56747 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CLDN6P56747 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN6P56747 AC073195.1-201ENST00000607241 877 ntBASIC19.33■□□□□ 0.68
CLDN6P56747 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
CLDN6P56747 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN6P56747 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN6P56747 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN6P56747 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 LINC01568-207ENST00000641790 1380 ntBASIC19.32■□□□□ 0.68
CLDN6P56747 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 AC242852.2-201ENST00000615738 1807 ntBASIC19.32■□□□□ 0.68
CLDN6P56747 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLDN6P56747 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN6P56747 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN6P56747 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN6P56747 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 NUDT16P1-203ENST00000513809 620 ntBASIC19.32■□□□□ 0.68
CLDN6P56747 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDN6P56747 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDN6P56747 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLDN6P56747 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLDN6P56747 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN6P56747 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN6P56747 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN6P56747 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN6P56747 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN6P56747 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLDN6P56747 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN6P56747 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN6P56747 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN6P56747 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN6P56747 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN6P56747 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLDN6P56747 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.31■□□□□ 0.68
CLDN6P56747 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.31■□□□□ 0.68
CLDN6P56747 AL031963.3-201ENST00000606441 850 ntBASIC19.31■□□□□ 0.68
CLDN6P56747 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN6P56747 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN6P56747 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN6P56747 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN6P56747 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CLDN6P56747 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN6P56747 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN6P56747 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN6P56747 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN6P56747 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN6P56747 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN6P56747 UNC93B2-201ENST00000285383 730 ntBASIC19.3■□□□□ 0.68
CLDN6P56747 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLDN6P56747 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.3■□□□□ 0.68
CLDN6P56747 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN6P56747 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN6P56747 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN6P56747 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN6P56747 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN6P56747 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN6P56747 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN6P56747 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN6P56747 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN6P56747 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN6P56747 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN6P56747 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN6P56747 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN6P56747 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN6P56747 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN6P56747 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN6P56747 TERF1P1-201ENST00000311003 1181 ntBASIC19.29■□□□□ 0.68
CLDN6P56747 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN6P56747 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN6P56747 AC113347.1-201ENST00000413321 391 ntBASIC19.29■□□□□ 0.68
CLDN6P56747 AL353807.1-201ENST00000427475 662 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms