Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH11P55287 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH11P55287 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH11P55287 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.33■□□□□ 0.52
CDH11P55287 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.33■□□□□ 0.52
CDH11P55287 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH11P55287 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH11P55287 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.33■□□□□ 0.52
CDH11P55287 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH11P55287 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH11P55287 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH11P55287 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDH11P55287 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH11P55287 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH11P55287 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH11P55287 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH11P55287 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH11P55287 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CDH11P55287 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH11P55287 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDH11P55287 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH11P55287 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH11P55287 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH11P55287 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CDH11P55287 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH11P55287 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH11P55287 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH11P55287 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH11P55287 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDH11P55287 POU5F1P4-201ENST00000413175 1085 ntBASIC18.32■□□□□ 0.52
CDH11P55287 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH11P55287 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH11P55287 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.32■□□□□ 0.52
CDH11P55287 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDH11P55287 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.32■□□□□ 0.52
CDH11P55287 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDH11P55287 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH11P55287 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH11P55287 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CDH11P55287 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDH11P55287 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CDH11P55287 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH11P55287 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH11P55287 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH11P55287 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH11P55287 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDH11P55287 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH11P55287 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 AIRN-201ENST00000601203 4374 ntBASIC18.31■□□□□ 0.52
CDH11P55287 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CDH11P55287 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDH11P55287 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDH11P55287 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.31■□□□□ 0.52
CDH11P55287 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH11P55287 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.31■□□□□ 0.52
CDH11P55287 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH11P55287 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
CDH11P55287 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDH11P55287 AC231657.2-201ENST00000624556 255 ntBASIC18.31■□□□□ 0.52
CDH11P55287 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDH11P55287 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH11P55287 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDH11P55287 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH11P55287 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH11P55287 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDH11P55287 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDH11P55287 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH11P55287 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH11P55287 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDH11P55287 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH11P55287 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH11P55287 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH11P55287 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDH11P55287 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 AC007322.1-201ENST00000426983 750 ntBASIC18.3■□□□□ 0.52
CDH11P55287 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH11P55287 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms