Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
EPHB4P54760 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.55■■□□□ 1.2
EPHB4P54760 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.55■■□□□ 1.2
EPHB4P54760 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC22.55■■□□□ 1.2
EPHB4P54760 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.55■■□□□ 1.2
EPHB4P54760 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.55■■□□□ 1.2
EPHB4P54760 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
EPHB4P54760 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.55■■□□□ 1.2
EPHB4P54760 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
EPHB4P54760 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
EPHB4P54760 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.55■■□□□ 1.2
EPHB4P54760 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
EPHB4P54760 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
EPHB4P54760 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.55■■□□□ 1.2
EPHB4P54760 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.55■■□□□ 1.2
EPHB4P54760 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.55■■□□□ 1.2
EPHB4P54760 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
EPHB4P54760 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
EPHB4P54760 RARRES2P10-201ENST00000564312 460 ntBASIC22.54■■□□□ 1.2
EPHB4P54760 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.54■■□□□ 1.2
EPHB4P54760 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
EPHB4P54760 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
EPHB4P54760 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
EPHB4P54760 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
EPHB4P54760 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
EPHB4P54760 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
EPHB4P54760 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
EPHB4P54760 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
EPHB4P54760 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
EPHB4P54760 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.53■■□□□ 1.2
EPHB4P54760 FEM1AP4-201ENST00000443167 1987 ntBASIC22.53■■□□□ 1.2
EPHB4P54760 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
EPHB4P54760 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
EPHB4P54760 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22.53■■□□□ 1.2
EPHB4P54760 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
EPHB4P54760 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
EPHB4P54760 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
EPHB4P54760 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
EPHB4P54760 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
EPHB4P54760 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
EPHB4P54760 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
EPHB4P54760 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
EPHB4P54760 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
EPHB4P54760 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
EPHB4P54760 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
EPHB4P54760 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
EPHB4P54760 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.52■■□□□ 1.2
EPHB4P54760 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
EPHB4P54760 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
EPHB4P54760 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
EPHB4P54760 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.52■■□□□ 1.2
EPHB4P54760 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
EPHB4P54760 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
EPHB4P54760 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.52■■□□□ 1.2
EPHB4P54760 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
EPHB4P54760 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.52■■□□□ 1.2
EPHB4P54760 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.52■■□□□ 1.2
EPHB4P54760 AC006557.6-201ENST00000623071 864 ntBASIC22.52■■□□□ 1.2
EPHB4P54760 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.52■■□□□ 1.2
EPHB4P54760 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
EPHB4P54760 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.52■■□□□ 1.2
EPHB4P54760 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.52■■□□□ 1.2
EPHB4P54760 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
EPHB4P54760 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
EPHB4P54760 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
EPHB4P54760 AF106564.1-201ENST00000607058 2553 ntBASIC22.51■■□□□ 1.19
EPHB4P54760 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
EPHB4P54760 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.51■■□□□ 1.19
EPHB4P54760 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
EPHB4P54760 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.51■■□□□ 1.19
EPHB4P54760 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.51■■□□□ 1.19
EPHB4P54760 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.51■■□□□ 1.19
EPHB4P54760 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
EPHB4P54760 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
EPHB4P54760 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.51■■□□□ 1.19
EPHB4P54760 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.51■■□□□ 1.19
EPHB4P54760 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
EPHB4P54760 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
EPHB4P54760 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
EPHB4P54760 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EPHB4P54760 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.5■■□□□ 1.19
EPHB4P54760 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
EPHB4P54760 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
EPHB4P54760 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EPHB4P54760 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EPHB4P54760 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
EPHB4P54760 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
EPHB4P54760 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
EPHB4P54760 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.5■■□□□ 1.19
EPHB4P54760 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.5■■□□□ 1.19
EPHB4P54760 AL049597.2-201ENST00000565575 961 ntBASIC22.5■■□□□ 1.19
EPHB4P54760 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
EPHB4P54760 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EPHB4P54760 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.5■■□□□ 1.19
EPHB4P54760 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.5■■□□□ 1.19
EPHB4P54760 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
EPHB4P54760 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.49■■□□□ 1.19
EPHB4P54760 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.49■■□□□ 1.19
EPHB4P54760 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
EPHB4P54760 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms