Protein–RNA interactions for Protein: P53225

YGR039W, Uncharacterized protein YGR039W, yeast

Predictions only

Length 103 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
YGR039W	P53225	PAA1	YDR071C	576 nt		-0.31	□□□□□ -2.46
YGR039W	P53225	YER135C	YER135C	393 nt		-0.31	□□□□□ -2.46
YGR039W	P53225	YIR044C	YIR044C	186 nt		-0.31	□□□□□ -2.46
YGR039W	P53225	YOR186C-A	YOR186C-A	210 nt		-0.31	□□□□□ -2.46
YGR039W	P53225	snR72	snR72	98 nt		-0.32	□□□□□ -2.46
YGR039W	P53225	YER078W-A	YER078W-A	165 nt		-0.32	□□□□□ -2.46
YGR039W	P53225	YMR321C	YMR321C	318 nt		-0.32	□□□□□ -2.46
YGR039W	P53225	PBI2	YNL015W	228 nt		-0.32	□□□□□ -2.46
YGR039W	P53225	MND1	YGL183C	660 nt		-0.33	□□□□□ -2.46
YGR039W	P53225	NFU1	YKL040C	771 nt		-0.33	□□□□□ -2.46
YGR039W	P53225	YLR399W-A	YLR399W-A	105 nt		-0.33	□□□□□ -2.46
YGR039W	P53225	YNL146W	YNL146W	303 nt		-0.33	□□□□□ -2.46
YGR039W	P53225	tF(GAA)B	tF(GAA)B	73 nt		-0.34	□□□□□ -2.46
YGR039W	P53225	tF(GAA)F	tF(GAA)F	73 nt		-0.34	□□□□□ -2.46
YGR039W	P53225	tF(GAA)G	tF(GAA)G	73 nt		-0.34	□□□□□ -2.46
YGR039W	P53225	tF(GAA)H1	tF(GAA)H1	73 nt		-0.34	□□□□□ -2.46
YGR039W	P53225	tF(GAA)H2	tF(GAA)H2	73 nt		-0.34	□□□□□ -2.46
YGR039W	P53225	tF(GAA)M	tF(GAA)M	73 nt		-0.34	□□□□□ -2.46
YGR039W	P53225	tF(GAA)P1	tF(GAA)P1	73 nt		-0.34	□□□□□ -2.46
YGR039W	P53225	tF(GAA)P2	tF(GAA)P2	73 nt		-0.34	□□□□□ -2.46
YGR039W	P53225	EMC4	YGL231C	573 nt		-0.34	□□□□□ -2.46
YGR039W	P53225	YKL202W	YKL202W	582 nt		-0.34	□□□□□ -2.46
YGR039W	P53225	YBR206W	YBR206W	324 nt		-0.34	□□□□□ -2.46
YGR039W	P53225	SOV1	YMR066W	2697 nt		-0.34	□□□□□ -2.46
YGR039W	P53225	SPO21	YOL091W	1830 nt		-0.35	□□□□□ -2.47
YGR039W	P53225	YOR345C	YOR345C	351 nt		-0.35	□□□□□ -2.47
YGR039W	P53225	SNU56	YDR240C	1479 nt		-0.35	□□□□□ -2.47
YGR039W	P53225	YDL187C	YDL187C	330 nt		-0.36	□□□□□ -2.47
YGR039W	P53225	HUR1	YGL168W	333 nt		-0.36	□□□□□ -2.47
YGR039W	P53225	YGL230C	YGL230C	444 nt		-0.36	□□□□□ -2.47
YGR039W	P53225	MAM33	YIL070C	801 nt		-0.36	□□□□□ -2.47
YGR039W	P53225	YIL066W-A	YIL066W-A	444 nt		-0.38	□□□□□ -2.47
YGR039W	P53225	ECM9	YKR004C	1134 nt		-0.38	□□□□□ -2.47
YGR039W	P53225	YML108W	YML108W	318 nt		-0.38	□□□□□ -2.47
YGR039W	P53225	YOL029C	YOL029C	606 nt		-0.38	□□□□□ -2.47
YGR039W	P53225	DCP1	YOL149W	696 nt		-0.38	□□□□□ -2.47
YGR039W	P53225	NNF2	YGR089W	2811 nt		-0.38	□□□□□ -2.47
YGR039W	P53225	YER175W-A	YER175W-A	165 nt		-0.39	□□□□□ -2.47
YGR039W	P53225	YKL136W	YKL136W	399 nt		-0.39	□□□□□ -2.47
YGR039W	P53225	COY1	YKL179C	2040 nt		-0.4	□□□□□ -2.47
YGR039W	P53225	YAR053W	YAR053W	297 nt		-0.4	□□□□□ -2.47
YGR039W	P53225	YNL211C	YNL211C	261 nt		-0.4	□□□□□ -2.47
YGR039W	P53225	YOL014W	YOL014W	375 nt		-0.4	□□□□□ -2.47
YGR039W	P53225	IPP1	YBR011C	864 nt		-0.4	□□□□□ -2.47
YGR039W	P53225	MYO1	YHR023W	5787 nt		-0.41	□□□□□ -2.47
YGR039W	P53225	THO2	YNL139C	4794 nt		-0.41	□□□□□ -2.47
YGR039W	P53225	YHL046W-A	YHL046W-A	327 nt		-0.41	□□□□□ -2.48
YGR039W	P53225	YKU70	YMR284W	1809 nt		-0.41	□□□□□ -2.48
YGR039W	P53225	UBS1	YBR165W	834 nt		-0.42	□□□□□ -2.48
YGR039W	P53225	NIP1	YMR309C	2439 nt		-0.42	□□□□□ -2.48
YGR039W	P53225	snR8	snR8	190 nt		-0.43	□□□□□ -2.48
YGR039W	P53225	YJR087W	YJR087W	351 nt		-0.43	□□□□□ -2.48
YGR039W	P53225	YKL023C-A	YKL023C-A	228 nt		-0.43	□□□□□ -2.48
YGR039W	P53225	snR51	snR51	107 nt		-0.43	□□□□□ -2.48
YGR039W	P53225	YDR210W	YDR210W	228 nt		-0.44	□□□□□ -2.48
YGR039W	P53225	YGR025W	YGR025W	303 nt		-0.44	□□□□□ -2.48
YGR039W	P53225	YJR011C	YJR011C	786 nt		-0.44	□□□□□ -2.48
YGR039W	P53225	YPL182C	YPL182C	384 nt		-0.44	□□□□□ -2.48
YGR039W	P53225	PTP2	YOR208W	2253 nt		-0.44	□□□□□ -2.48
YGR039W	P53225	SLX9	YGR081C	633 nt		-0.45	□□□□□ -2.48
YGR039W	P53225	YLR171W	YLR171W	390 nt		-0.45	□□□□□ -2.48
YGR039W	P53225	STF2	YGR008C	255 nt		-0.46	□□□□□ -2.48
YGR039W	P53225	RPS20	YHL015W	366 nt		-0.46	□□□□□ -2.48
YGR039W	P53225	TFB5	YDR079C-A	219 nt		-0.48	□□□□□ -2.49
YGR039W	P53225	tN(GUU)Q	tN(GUU)Q	71 nt		-0.48	□□□□□ -2.49
YGR039W	P53225	TIM13	YGR181W	318 nt		-0.48	□□□□□ -2.49
YGR039W	P53225	YCR001W	YCR001W	315 nt		-0.49	□□□□□ -2.49
YGR039W	P53225	SDH7	YDR511W	402 nt		-0.49	□□□□□ -2.49
YGR039W	P53225	YIL029C	YIL029C	429 nt		-0.49	□□□□□ -2.49
YGR039W	P53225	YKL044W	YKL044W	321 nt		-0.49	□□□□□ -2.49
YGR039W	P53225	snR128	snR128	126 nt		-0.51	□□□□□ -2.49
YGR039W	P53225	BUL2	YML111W	2763 nt		-0.51	□□□□□ -2.49
YGR039W	P53225	NIP100	YPL174C	2607 nt		-0.52	□□□□□ -2.49
YGR039W	P53225	YDL185C-A	YDL185C-A	228 nt		-0.53	□□□□□ -2.49
YGR039W	P53225	YJR141W	YJR141W	1044 nt		-0.53	□□□□□ -2.49
YGR039W	P53225	ATG31	YDR022C	591 nt		-0.54	□□□□□ -2.5
YGR039W	P53225	YEL073C	YEL073C	324 nt		-0.54	□□□□□ -2.5
YGR039W	P53225	YGR164W	YGR164W	336 nt		-0.54	□□□□□ -2.5
YGR039W	P53225	HUG1	YML058W-A	207 nt		-0.55	□□□□□ -2.5
YGR039W	P53225	MRPS8	YMR158W	468 nt		-0.55	□□□□□ -2.5
YGR039W	P53225	YCR100C	YCR100C	951 nt		-0.56	□□□□□ -2.5
YGR039W	P53225	RPF1	YHR088W	888 nt		-0.56	□□□□□ -2.5
YGR039W	P53225	YHR131W-A	YHR131W-A	246 nt		-0.56	□□□□□ -2.5
YGR039W	P53225	HMLALPHA2	YCL067C	633 nt		-0.57	□□□□□ -2.5
YGR039W	P53225	MATALPHA2	YCR039C	633 nt		-0.57	□□□□□ -2.5
YGR039W	P53225	SBH2	YER019C-A	267 nt		-0.57	□□□□□ -2.5
YGR039W	P53225	TSC3	YBR058C-A	243 nt		-0.57	□□□□□ -2.5
YGR039W	P53225	SEM1	YDR363W-A	270 nt		-0.58	□□□□□ -2.5
YGR039W	P53225	SEC10	YLR166C	2616 nt		-0.6	□□□□□ -2.51
YGR039W	P53225	YMR307C-A	YMR307C-A	195 nt		-0.6	□□□□□ -2.51
YGR039W	P53225	SVS1	YPL163C	783 nt		-0.6	□□□□□ -2.51
YGR039W	P53225	YJL020W-A	YJL020W-A	258 nt		-0.61	□□□□□ -2.51
YGR039W	P53225	YLL006W-A	YLL006W-A	177 nt		-0.61	□□□□□ -2.51
YGR039W	P53225	YNL319W	YNL319W	441 nt		-0.61	□□□□□ -2.51
YGR039W	P53225	YOR011W-A	YOR011W-A	207 nt		-0.61	□□□□□ -2.51
YGR039W	P53225	RAD61	YDR014W	1944 nt		-0.62	□□□□□ -2.51
YGR039W	P53225	BER1	YLR412W	825 nt		-0.62	□□□□□ -2.51
YGR039W	P53225	YNL058C	YNL058C	951 nt		-0.62	□□□□□ -2.51
YGR039W	P53225	YOL038C-A	YOL038C-A	96 nt		-0.62	□□□□□ -2.51
YGR039W	P53225	SGF11	YPL047W	300 nt		-0.62	□□□□□ -2.51

Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms