Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AL157384.1-201ENST00000445995 2473 ntBASIC19.4■□□□□ 0.7
RAB28P51157 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RAB28P51157 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RAB28P51157 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RAB28P51157 AC026366.1-201ENST00000488803 879 ntBASIC19.4■□□□□ 0.7
RAB28P51157 AP003097.1-201ENST00000530657 1135 ntBASIC19.4■□□□□ 0.7
RAB28P51157 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.4■□□□□ 0.7
RAB28P51157 AC006557.6-201ENST00000623071 864 ntBASIC19.4■□□□□ 0.7
RAB28P51157 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 AC092667.1-201ENST00000434301 2586 ntBASIC19.39■□□□□ 0.7
RAB28P51157 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB28P51157 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.39■□□□□ 0.7
RAB28P51157 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.39■□□□□ 0.7
RAB28P51157 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB28P51157 LINC01006-201ENST00000333319 2292 ntBASIC19.39■□□□□ 0.69
RAB28P51157 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RAB28P51157 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB28P51157 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB28P51157 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RAB28P51157 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB28P51157 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB28P51157 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.39■□□□□ 0.69
RAB28P51157 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAB28P51157 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.39■□□□□ 0.69
RAB28P51157 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB28P51157 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB28P51157 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.39■□□□□ 0.69
RAB28P51157 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RAB28P51157 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB28P51157 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB28P51157 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB28P51157 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB28P51157 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RAB28P51157 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB28P51157 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB28P51157 AL512408.1-201ENST00000569378 2000 ntBASIC19.39■□□□□ 0.69
RAB28P51157 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RAB28P51157 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB28P51157 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB28P51157 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB28P51157 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB28P51157 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB28P51157 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB28P51157 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB28P51157 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RAB28P51157 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAB28P51157 ESRRAP1-201ENST00000400596 1257 ntBASIC19.38■□□□□ 0.69
RAB28P51157 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RAB28P51157 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB28P51157 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB28P51157 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB28P51157 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB28P51157 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.38■□□□□ 0.69
RAB28P51157 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAB28P51157 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.38■□□□□ 0.69
RAB28P51157 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB28P51157 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB28P51157 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.38■□□□□ 0.69
RAB28P51157 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB28P51157 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB28P51157 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RAB28P51157 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB28P51157 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB28P51157 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB28P51157 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB28P51157 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB28P51157 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB28P51157 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB28P51157 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB28P51157 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RAB28P51157 POU5F1P3-201ENST00000428824 1078 ntBASIC19.37■□□□□ 0.69
RAB28P51157 TSPY20P-201ENST00000450910 630 ntBASIC19.37■□□□□ 0.69
RAB28P51157 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB28P51157 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB28P51157 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.37■□□□□ 0.69
RAB28P51157 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RAB28P51157 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB28P51157 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.37■□□□□ 0.69
RAB28P51157 AC008687.6-201ENST00000596318 630 ntBASIC19.37■□□□□ 0.69
RAB28P51157 AC008403.3-201ENST00000598924 454 ntBASIC19.37■□□□□ 0.69
RAB28P51157 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB28P51157 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB28P51157 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB28P51157 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
RAB28P51157 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB28P51157 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB28P51157 AL162377.1-201ENST00000618844 1793 ntBASIC19.37■□□□□ 0.69
RAB28P51157 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms