Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF144AP50876 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF144AP50876 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF144AP50876 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF144AP50876 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF144AP50876 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF144AP50876 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF144AP50876 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF144AP50876 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF144AP50876 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF144AP50876 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF144AP50876 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF144AP50876 KRT17P1-201ENST00000399211 1546 ntBASIC18.63■□□□□ 0.57
RNF144AP50876 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF144AP50876 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RNF144AP50876 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF144AP50876 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF144AP50876 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF144AP50876 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF144AP50876 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
RNF144AP50876 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF144AP50876 AC007952.6-201ENST00000573168 2673 ntBASIC18.62■□□□□ 0.57
RNF144AP50876 AC003957.1-201ENST00000625108 2673 ntBASIC18.62■□□□□ 0.57
RNF144AP50876 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF144AP50876 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF144AP50876 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF144AP50876 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF144AP50876 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF144AP50876 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.62■□□□□ 0.57
RNF144AP50876 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF144AP50876 AC105036.2-201ENST00000569468 176 ntBASIC18.62■□□□□ 0.57
RNF144AP50876 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
RNF144AP50876 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF144AP50876 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF144AP50876 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF144AP50876 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF144AP50876 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF144AP50876 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF144AP50876 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF144AP50876 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF144AP50876 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF144AP50876 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF144AP50876 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF144AP50876 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
RNF144AP50876 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF144AP50876 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF144AP50876 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF144AP50876 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF144AP50876 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF144AP50876 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF144AP50876 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF144AP50876 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF144AP50876 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF144AP50876 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF144AP50876 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF144AP50876 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF144AP50876 AC010980.2-201ENST00000587099 1412 ntBASIC18.61■□□□□ 0.57
RNF144AP50876 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF144AP50876 MCRIP2P1-201ENST00000394346 511 ntBASIC18.61■□□□□ 0.57
RNF144AP50876 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF144AP50876 AC006970.2-201ENST00000450065 779 ntBASIC18.61■□□□□ 0.57
RNF144AP50876 AL162412.1-201ENST00000567129 965 ntBASIC18.61■□□□□ 0.57
RNF144AP50876 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF144AP50876 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RNF144AP50876 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RNF144AP50876 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF144AP50876 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
RNF144AP50876 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RNF144AP50876 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF144AP50876 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF144AP50876 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF144AP50876 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF144AP50876 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF144AP50876 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RNF144AP50876 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF144AP50876 AIRN-201ENST00000601203 4374 ntBASIC18.6■□□□□ 0.57
RNF144AP50876 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF144AP50876 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF144AP50876 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF144AP50876 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF144AP50876 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF144AP50876 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF144AP50876 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.6■□□□□ 0.57
RNF144AP50876 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.6■□□□□ 0.57
RNF144AP50876 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF144AP50876 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF144AP50876 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RNF144AP50876 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RNF144AP50876 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF144AP50876 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF144AP50876 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF144AP50876 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF144AP50876 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF144AP50876 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF144AP50876 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms