Protein–RNA interactions for Protein: P46669

RPA43, DNA-directed RNA polymerase I subunit RPA43, yeastyeast

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA43P46669 ISD11YER048W-A 285 nt0.58□□□□□ -2.32
RPA43P46669 QCR9YGR183C 201 nt0.58□□□□□ -2.32
RPA43P46669 YNL058CYNL058C 951 nt0.58□□□□□ -2.32
RPA43P46669 CUL3YGR003W 2235 nt0.58□□□□□ -2.32
RPA43P46669 RAD34YDR314C 2079 nt0.57□□□□□ -2.32
RPA43P46669 PCF11YDR228C 1881 nt0.57□□□□□ -2.32
RPA43P46669 CBS1YDL069C 690 nt0.57□□□□□ -2.32
RPA43P46669 YHR063W-AYHR063W-A 336 nt0.57□□□□□ -2.32
RPA43P46669 YLR101CYLR101C 396 nt0.57□□□□□ -2.32
RPA43P46669 CMC4YMR194C-B 222 nt0.57□□□□□ -2.32
RPA43P46669 YPL261CYPL261C 309 nt0.57□□□□□ -2.32
RPA43P46669 LOA1YPR139C 903 nt0.57□□□□□ -2.32
RPA43P46669 YCK3YER123W 1575 nt0.57□□□□□ -2.32
RPA43P46669 NHP2YDL208W 471 nt0.56□□□□□ -2.32
RPA43P46669 YGR174W-AYGR174W-A 87 nt0.56□□□□□ -2.32
RPA43P46669 INP2YMR163C 2118 nt0.55□□□□□ -2.32
RPA43P46669 YDR344CYDR344C 444 nt0.55□□□□□ -2.32
RPA43P46669 YDR521WYDR521W 336 nt0.55□□□□□ -2.32
RPA43P46669 YEL030C-AYEL030C-A 315 nt0.55□□□□□ -2.32
RPA43P46669 YBL008W-AYBL008W-A 240 nt0.55□□□□□ -2.32
RPA43P46669 YOR282WYOR282W 321 nt0.55□□□□□ -2.32
RPA43P46669 PAN2YGL094C 3348 nt0.55□□□□□ -2.32
RPA43P46669 UTP10YJL109C 5310 nt0.54□□□□□ -2.32
RPA43P46669 tT(AGU)BtT(AGU)B 73 nt0.54□□□□□ -2.32
RPA43P46669 tT(AGU)CtT(AGU)C 73 nt0.54□□□□□ -2.32
RPA43P46669 tT(AGU)DtT(AGU)D 73 nt0.54□□□□□ -2.32
RPA43P46669 tT(AGU)HtT(AGU)H 73 nt0.54□□□□□ -2.32
RPA43P46669 tT(AGU)I1tT(AGU)I1 73 nt0.54□□□□□ -2.32
RPA43P46669 tT(AGU)I2tT(AGU)I2 73 nt0.54□□□□□ -2.32
RPA43P46669 tT(AGU)JtT(AGU)J 73 nt0.54□□□□□ -2.32
RPA43P46669 tT(AGU)N1tT(AGU)N1 73 nt0.54□□□□□ -2.32
RPA43P46669 tT(AGU)N2tT(AGU)N2 73 nt0.54□□□□□ -2.32
RPA43P46669 tT(AGU)O1tT(AGU)O1 73 nt0.54□□□□□ -2.32
RPA43P46669 tT(AGU)O2tT(AGU)O2 73 nt0.54□□□□□ -2.32
RPA43P46669 RPL26AYLR344W 384 nt0.54□□□□□ -2.32
RPA43P46669 BFR2YDR299W 1605 nt0.53□□□□□ -2.32
RPA43P46669 YAP6YDR259C 1152 nt0.53□□□□□ -2.32
RPA43P46669 ECM12YHR021W-A 456 nt0.53□□□□□ -2.32
RPA43P46669 YIR044CYIR044C 186 nt0.53□□□□□ -2.32
RPA43P46669 YML002WYML002W 2214 nt0.52□□□□□ -2.33
RPA43P46669 YLL007CYLL007C 1998 nt0.52□□□□□ -2.33
RPA43P46669 MAM33YIL070C 801 nt0.51□□□□□ -2.33
RPA43P46669 YKL145W-AYKL145W-A 93 nt0.51□□□□□ -2.33
RPA43P46669 YOL014WYOL014W 375 nt0.51□□□□□ -2.33
RPA43P46669 LTE1YAL024C 4308 nt0.5□□□□□ -2.33
RPA43P46669 YHL042WYHL042W 453 nt0.5□□□□□ -2.33
RPA43P46669 ISF1YMR081C 1017 nt0.5□□□□□ -2.33
RPA43P46669 PTP2YOR208W 2253 nt0.5□□□□□ -2.33
RPA43P46669 NPR2YEL062W 1848 nt0.49□□□□□ -2.33
RPA43P46669 UBC7YMR022W 498 nt0.48□□□□□ -2.33
RPA43P46669 YPL044CYPL044C 549 nt0.48□□□□□ -2.33
RPA43P46669 OLI1Q0130 231 nt0.47□□□□□ -2.33
RPA43P46669 MRPL50YNR022C 420 nt0.47□□□□□ -2.33
RPA43P46669 PMP1YCR024C-A 123 nt0.46□□□□□ -2.34
RPA43P46669 ATG31YDR022C 591 nt0.46□□□□□ -2.34
RPA43P46669 RPS20YHL015W 366 nt0.46□□□□□ -2.34
RPA43P46669 YJR011CYJR011C 786 nt0.46□□□□□ -2.34
RPA43P46669 RPL38YLR325C 237 nt0.46□□□□□ -2.34
RPA43P46669 YML007C-AYML007C-A 111 nt0.46□□□□□ -2.34
RPA43P46669 ATP19YOL077W-A 207 nt0.46□□□□□ -2.34
RPA43P46669 YBR064WYBR064W 429 nt0.46□□□□□ -2.34
RPA43P46669 YPR002C-AYPR002C-A 198 nt0.46□□□□□ -2.34
RPA43P46669 YDR426CYDR426C 378 nt0.45□□□□□ -2.34
RPA43P46669 NOP9YJL010C 2001 nt0.45□□□□□ -2.34
RPA43P46669 MCM10YIL150C 1716 nt0.44□□□□□ -2.34
RPA43P46669 CHS6YJL099W 2241 nt0.44□□□□□ -2.34
RPA43P46669 YOR218CYOR218C 420 nt0.44□□□□□ -2.34
RPA43P46669 RPS24BYIL069C 408 nt0.43□□□□□ -2.34
RPA43P46669 YBR206WYBR206W 324 nt0.43□□□□□ -2.34
RPA43P46669 ULP2YIL031W 3105 nt0.42□□□□□ -2.34
RPA43P46669 BSC3YLR465C 309 nt0.42□□□□□ -2.34
RPA43P46669 SPO21YOL091W 1830 nt0.42□□□□□ -2.34
RPA43P46669 TRS65YGR166W 1683 nt0.41□□□□□ -2.34
RPA43P46669 RPL26BYGR034W 384 nt0.41□□□□□ -2.34
RPA43P46669 PAA1YDR071C 576 nt0.4□□□□□ -2.35
RPA43P46669 YIL134C-AYIL134C-A 204 nt0.4□□□□□ -2.35
RPA43P46669 PCC1YKR095W-A 267 nt0.4□□□□□ -2.35
RPA43P46669 YLR456WYLR456W 615 nt0.4□□□□□ -2.35
RPA43P46669 YSP1YHR155W 3687 nt0.4□□□□□ -2.35
RPA43P46669 YPL185WYPL185W 396 nt0.39□□□□□ -2.35
RPA43P46669 NIP100YPL174C 2607 nt0.37□□□□□ -2.35
RPA43P46669 AI1Q0050 2505 nt0.37□□□□□ -2.35
RPA43P46669 FMP27YLR454W 7887 nt0.37□□□□□ -2.35
RPA43P46669 HMRA2YCR096C 360 nt0.36□□□□□ -2.35
RPA43P46669 YMR321CYMR321C 318 nt0.36□□□□□ -2.35
RPA43P46669 YOR011W-AYOR011W-A 207 nt0.36□□□□□ -2.35
RPA43P46669 YPL068CYPL068C 882 nt0.36□□□□□ -2.35
RPA43P46669 YJL127W-AYJL127W-A 117 nt0.35□□□□□ -2.35
RPA43P46669 YLR406C-AYLR406C-A 150 nt0.35□□□□□ -2.35
RPA43P46669 PET111YMR257C 2403 nt0.34□□□□□ -2.35
RPA43P46669 YJL007CYJL007C 315 nt0.34□□□□□ -2.36
RPA43P46669 BIR1YJR089W 2865 nt0.33□□□□□ -2.36
RPA43P46669 YFR012W-AYFR012W-A 87 nt0.33□□□□□ -2.36
RPA43P46669 YKL063CYKL063C 504 nt0.33□□□□□ -2.36
RPA43P46669 YLR434CYLR434C 384 nt0.33□□□□□ -2.36
RPA43P46669 ABF2YMR072W 552 nt0.33□□□□□ -2.36
RPA43P46669 YNL211CYNL211C 261 nt0.33□□□□□ -2.36
RPA43P46669 YOR053WYOR053W 342 nt0.33□□□□□ -2.36
RPA43P46669 FYV10YIL097W 1551 nt0.32□□□□□ -2.36
RPA43P46669 SBH1YER087C-B 249 nt0.31□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 30.8 ms