Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP13P45452 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.86■□□□□ 0.93
MMP13P45452 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MMP13P45452 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP13P45452 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP13P45452 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.86■□□□□ 0.93
MMP13P45452 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP13P45452 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP13P45452 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP13P45452 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.85■□□□□ 0.93
MMP13P45452 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP13P45452 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
MMP13P45452 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP13P45452 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP13P45452 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP13P45452 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP13P45452 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
MMP13P45452 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP13P45452 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP13P45452 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.85■□□□□ 0.93
MMP13P45452 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP13P45452 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP13P45452 OR10C1-204ENST00000622521 1039 ntBASIC20.85■□□□□ 0.93
MMP13P45452 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP13P45452 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.85■□□□□ 0.93
MMP13P45452 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
MMP13P45452 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP13P45452 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP13P45452 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP13P45452 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP13P45452 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
MMP13P45452 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.84■□□□□ 0.93
MMP13P45452 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.84■□□□□ 0.93
MMP13P45452 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP13P45452 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP13P45452 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP13P45452 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MMP13P45452 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
MMP13P45452 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MMP13P45452 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.84■□□□□ 0.93
MMP13P45452 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
MMP13P45452 AL050303.2-201ENST00000619798 666 ntBASIC20.84■□□□□ 0.93
MMP13P45452 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MMP13P45452 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
MMP13P45452 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.84■□□□□ 0.93
MMP13P45452 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
MMP13P45452 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP13P45452 TCF3P1-201ENST00000423021 1937 ntBASIC20.84■□□□□ 0.93
MMP13P45452 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP13P45452 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP13P45452 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.84■□□□□ 0.93
MMP13P45452 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP13P45452 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.84■□□□□ 0.93
MMP13P45452 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.83■□□□□ 0.93
MMP13P45452 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP13P45452 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MMP13P45452 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.83■□□□□ 0.93
MMP13P45452 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.83■□□□□ 0.93
MMP13P45452 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP13P45452 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MMP13P45452 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
MMP13P45452 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MMP13P45452 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP13P45452 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP13P45452 AC006970.2-201ENST00000450065 779 ntBASIC20.83■□□□□ 0.93
MMP13P45452 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP13P45452 MIR2861-201ENST00000636310 90 ntBASIC20.83■□□□□ 0.93
MMP13P45452 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP13P45452 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
MMP13P45452 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.83■□□□□ 0.92
MMP13P45452 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
MMP13P45452 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MMP13P45452 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.83■□□□□ 0.92
MMP13P45452 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.83■□□□□ 0.92
MMP13P45452 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
MMP13P45452 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.82■□□□□ 0.92
MMP13P45452 CYP21A1P-202ENST00000354927 1481 ntBASIC20.82■□□□□ 0.92
MMP13P45452 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MMP13P45452 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP13P45452 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP13P45452 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.82■□□□□ 0.92
MMP13P45452 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.82■□□□□ 0.92
MMP13P45452 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.82■□□□□ 0.92
MMP13P45452 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.82■□□□□ 0.92
MMP13P45452 AC133552.2-202ENST00000575694 574 ntBASIC20.82■□□□□ 0.92
MMP13P45452 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.82■□□□□ 0.92
MMP13P45452 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP13P45452 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP13P45452 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MMP13P45452 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MMP13P45452 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP13P45452 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.82■□□□□ 0.92
MMP13P45452 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP13P45452 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
MMP13P45452 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP13P45452 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
MMP13P45452 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP13P45452 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms