Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 YMR242W-AYMR242W-A 90 nt0.8□□□□□ -2.28
LSM4P40070 IRC23YOR044W 474 nt0.8□□□□□ -2.28
LSM4P40070 BUD3YCL014W 4911 nt0.79□□□□□ -2.28
LSM4P40070 SDH2YLL041C 801 nt0.79□□□□□ -2.28
LSM4P40070 YNL058CYNL058C 951 nt0.79□□□□□ -2.28
LSM4P40070 RPB10YOR210W 213 nt0.79□□□□□ -2.28
LSM4P40070 YPR012WYPR012W 255 nt0.79□□□□□ -2.28
LSM4P40070 YPR170W-AYPR170W-A 186 nt0.79□□□□□ -2.28
LSM4P40070 ZIP2YGL249W 2115 nt0.79□□□□□ -2.28
LSM4P40070 snR72snR72 98 nt0.78□□□□□ -2.28
LSM4P40070 RPL38YLR325C 237 nt0.78□□□□□ -2.28
LSM4P40070 YOR199WYOR199W 330 nt0.78□□□□□ -2.28
LSM4P40070 APL3YBL037W 3078 nt0.78□□□□□ -2.29
LSM4P40070 UTP8YGR128C 2142 nt0.77□□□□□ -2.29
LSM4P40070 INP2YMR163C 2118 nt0.77□□□□□ -2.29
LSM4P40070 YAR009CYAR009C 3591 nt0.77□□□□□ -2.29
LSM4P40070 SPT21YMR179W 2277 nt0.77□□□□□ -2.29
LSM4P40070 NPC2YDL046W 522 nt0.77□□□□□ -2.29
LSM4P40070 YGR035CYGR035C 351 nt0.77□□□□□ -2.29
LSM4P40070 RPS20YHL015W 366 nt0.77□□□□□ -2.29
LSM4P40070 YJL135WYJL135W 318 nt0.77□□□□□ -2.29
LSM4P40070 YOL160WYOL160W 342 nt0.77□□□□□ -2.29
LSM4P40070 YPL261CYPL261C 309 nt0.77□□□□□ -2.29
LSM4P40070 SCW11YGL028C 1629 nt0.77□□□□□ -2.29
LSM4P40070 YML007C-AYML007C-A 111 nt0.76□□□□□ -2.29
LSM4P40070 YOR108C-AYOR108C-A 210 nt0.76□□□□□ -2.29
LSM4P40070 FIG4YNL325C 2640 nt0.75□□□□□ -2.29
LSM4P40070 ALY2YJL084C 3141 nt0.75□□□□□ -2.29
LSM4P40070 CSN9YDR179C 489 nt0.75□□□□□ -2.29
LSM4P40070 tW(UCA)QtW(UCA)Q 74 nt0.75□□□□□ -2.29
LSM4P40070 YIL142C-AYIL142C-A 333 nt0.75□□□□□ -2.29
LSM4P40070 YAR053WYAR053W 297 nt0.75□□□□□ -2.29
LSM4P40070 YLR334CYLR334C 381 nt0.75□□□□□ -2.29
LSM4P40070 YPR002C-AYPR002C-A 198 nt0.75□□□□□ -2.29
LSM4P40070 RAD34YDR314C 2079 nt0.74□□□□□ -2.29
LSM4P40070 SLI15YBR156C 2097 nt0.74□□□□□ -2.29
LSM4P40070 MPT5YGL178W 2580 nt0.74□□□□□ -2.29
LSM4P40070 YPR117WYPR117W 7470 nt0.74□□□□□ -2.29
LSM4P40070 YAL063C-AYAL063C-A 291 nt0.74□□□□□ -2.29
LSM4P40070 YMR290W-AYMR290W-A 348 nt0.74□□□□□ -2.29
LSM4P40070 NIP100YPL174C 2607 nt0.74□□□□□ -2.29
LSM4P40070 RIM20YOR275C 1986 nt0.74□□□□□ -2.29
LSM4P40070 LCD1YDR499W 2244 nt0.73□□□□□ -2.29
LSM4P40070 YDR426CYDR426C 378 nt0.73□□□□□ -2.29
LSM4P40070 YBR012CYBR012C 420 nt0.73□□□□□ -2.29
LSM4P40070 PCC1YKR095W-A 267 nt0.72□□□□□ -2.29
LSM4P40070 BIL1YOR304C-A 231 nt0.72□□□□□ -2.29
LSM4P40070 YPR016W-AYPR016W-A 261 nt0.72□□□□□ -2.29
LSM4P40070 SLD3YGL113W 2007 nt0.72□□□□□ -2.29
LSM4P40070 YMR160WYMR160W 2451 nt0.72□□□□□ -2.29
LSM4P40070 SET3YKR029C 2256 nt0.71□□□□□ -2.3
LSM4P40070 MAM33YIL070C 801 nt0.71□□□□□ -2.3
LSM4P40070 MMS4YBR098W 2076 nt0.7□□□□□ -2.3
LSM4P40070 TRS65YGR166W 1683 nt0.7□□□□□ -2.3
LSM4P40070 HMRA1YCR097W 381 nt0.7□□□□□ -2.3
LSM4P40070 RPL35AYDL191W 363 nt0.7□□□□□ -2.3
LSM4P40070 YBL008W-AYBL008W-A 240 nt0.7□□□□□ -2.3
LSM4P40070 YBR221W-AYBR221W-A 105 nt0.7□□□□□ -2.3
LSM4P40070 AIM44YPL158C 2277 nt0.69□□□□□ -2.3
LSM4P40070 STO1YMR125W 2586 nt0.69□□□□□ -2.3
LSM4P40070 YHL046W-AYHL046W-A 327 nt0.69□□□□□ -2.3
LSM4P40070 YHR007C-AYHR007C-A 216 nt0.69□□□□□ -2.3
LSM4P40070 YIR044CYIR044C 186 nt0.69□□□□□ -2.3
LSM4P40070 YJR011CYJR011C 786 nt0.69□□□□□ -2.3
LSM4P40070 UTP20YBL004W 7482 nt0.69□□□□□ -2.3
LSM4P40070 PKH2YOL100W 3246 nt0.68□□□□□ -2.3
LSM4P40070 PAN2YGL094C 3348 nt0.68□□□□□ -2.3
LSM4P40070 snR56snR56 88 nt0.68□□□□□ -2.3
LSM4P40070 GPG1YGL121C 381 nt0.68□□□□□ -2.3
LSM4P40070 HTB2YBL002W 396 nt0.68□□□□□ -2.3
LSM4P40070 PDE2YOR360C 1581 nt0.68□□□□□ -2.3
LSM4P40070 YDL206WYDL206W 2289 nt0.68□□□□□ -2.3
LSM4P40070 GIM4YEL003W 336 nt0.67□□□□□ -2.3
LSM4P40070 YPR197CYPR197C 564 nt0.67□□□□□ -2.3
LSM4P40070 CUL3YGR003W 2235 nt0.66□□□□□ -2.3
LSM4P40070 YDR521WYDR521W 336 nt0.66□□□□□ -2.3
LSM4P40070 YAR029WYAR029W 225 nt0.66□□□□□ -2.3
LSM4P40070 YAF9YNL107W 681 nt0.66□□□□□ -2.3
LSM4P40070 YBR200W-AYBR200W-A 165 nt0.66□□□□□ -2.3
LSM4P40070 NUP157YER105C 4176 nt0.66□□□□□ -2.3
LSM4P40070 YLL007CYLL007C 1998 nt0.65□□□□□ -2.31
LSM4P40070 YDR102CYDR102C 333 nt0.65□□□□□ -2.31
LSM4P40070 YHR175W-AYHR175W-A 150 nt0.65□□□□□ -2.31
LSM4P40070 TAR1YLR154W-C 375 nt0.65□□□□□ -2.31
LSM4P40070 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
LSM4P40070 YHL042WYHL042W 453 nt0.64□□□□□ -2.31
LSM4P40070 YBR206WYBR206W 324 nt0.64□□□□□ -2.31
LSM4P40070 PTP2YOR208W 2253 nt0.64□□□□□ -2.31
LSM4P40070 YDR048CYDR048C 315 nt0.63□□□□□ -2.31
LSM4P40070 tR(ACG)Q2tR(ACG)Q2 74 nt0.63□□□□□ -2.31
LSM4P40070 WAR1YML076C 2835 nt0.63□□□□□ -2.31
LSM4P40070 SEC1YDR164C 2175 nt0.63□□□□□ -2.31
LSM4P40070 YPL038W-AYPL038W-A 192 nt0.62□□□□□ -2.31
LSM4P40070 YBR064WYBR064W 429 nt0.62□□□□□ -2.31
LSM4P40070 YDL240C-AYDL240C-A 138 nt0.61□□□□□ -2.31
LSM4P40070 YMR031W-AYMR031W-A 327 nt0.61□□□□□ -2.31
LSM4P40070 HMRA2YCR096C 360 nt0.6□□□□□ -2.31
LSM4P40070 SSS1YDR086C 243 nt0.6□□□□□ -2.31
LSM4P40070 YJL120WYJL120W 324 nt0.6□□□□□ -2.31
LSM4P40070 YOR218CYOR218C 420 nt0.6□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 117.2 ms