Protein–RNA interactions for Protein: P38805

RPF1, Ribosome production factor 1, yeastyeast

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPF1P38805 UTP10YJL109C 5310 nt0.53□□□□□ -2.32
RPF1P38805 YOR282WYOR282W 321 nt0.52□□□□□ -2.33
RPF1P38805 YML002WYML002W 2214 nt0.52□□□□□ -2.33
RPF1P38805 YGR174W-AYGR174W-A 87 nt0.51□□□□□ -2.33
RPF1P38805 ECM12YHR021W-A 456 nt0.51□□□□□ -2.33
RPF1P38805 YIR044CYIR044C 186 nt0.51□□□□□ -2.33
RPF1P38805 ISF1YMR081C 1017 nt0.51□□□□□ -2.33
RPF1P38805 NHP2YDL208W 471 nt0.5□□□□□ -2.33
RPF1P38805 MAM33YIL070C 801 nt0.5□□□□□ -2.33
RPF1P38805 YBR064WYBR064W 429 nt0.5□□□□□ -2.33
RPF1P38805 LTE1YAL024C 4308 nt0.5□□□□□ -2.33
RPF1P38805 YLL007CYLL007C 1998 nt0.49□□□□□ -2.33
RPF1P38805 PMP1YCR024C-A 123 nt0.49□□□□□ -2.33
RPF1P38805 MRPL50YNR022C 420 nt0.49□□□□□ -2.33
RPF1P38805 NPR2YEL062W 1848 nt0.48□□□□□ -2.33
RPF1P38805 ATG31YDR022C 591 nt0.48□□□□□ -2.33
RPF1P38805 YJR011CYJR011C 786 nt0.48□□□□□ -2.33
RPF1P38805 ATP19YOL077W-A 207 nt0.48□□□□□ -2.33
RPF1P38805 NOP9YJL010C 2001 nt0.47□□□□□ -2.33
RPF1P38805 YDR521WYDR521W 336 nt0.47□□□□□ -2.33
RPF1P38805 RPS20YHL015W 366 nt0.47□□□□□ -2.33
RPF1P38805 CMC4YMR194C-B 222 nt0.47□□□□□ -2.33
RPF1P38805 YPL044CYPL044C 549 nt0.47□□□□□ -2.33
RPF1P38805 OLI1Q0130 231 nt0.46□□□□□ -2.34
RPF1P38805 RPL38YLR325C 237 nt0.46□□□□□ -2.34
RPF1P38805 YBR206WYBR206W 324 nt0.46□□□□□ -2.34
RPF1P38805 CHS6YJL099W 2241 nt0.46□□□□□ -2.34
RPF1P38805 MCM10YIL150C 1716 nt0.46□□□□□ -2.34
RPF1P38805 YCK3YER123W 1575 nt0.45□□□□□ -2.34
RPF1P38805 RPS24BYIL069C 408 nt0.45□□□□□ -2.34
RPF1P38805 YPR002C-AYPR002C-A 198 nt0.45□□□□□ -2.34
RPF1P38805 PTP2YOR208W 2253 nt0.45□□□□□ -2.34
RPF1P38805 YML007C-AYML007C-A 111 nt0.44□□□□□ -2.34
RPF1P38805 NIP100YPL174C 2607 nt0.43□□□□□ -2.34
RPF1P38805 BSC3YLR465C 309 nt0.43□□□□□ -2.34
RPF1P38805 YOR029WYOR029W 336 nt0.42□□□□□ -2.34
RPF1P38805 PRP16YKR086W 3216 nt0.41□□□□□ -2.34
RPF1P38805 YDR426CYDR426C 378 nt0.41□□□□□ -2.34
RPF1P38805 YLR456WYLR456W 615 nt0.41□□□□□ -2.34
RPF1P38805 RPL26BYGR034W 384 nt0.4□□□□□ -2.35
RPF1P38805 tT(AGU)BtT(AGU)B 73 nt0.4□□□□□ -2.35
RPF1P38805 tT(AGU)CtT(AGU)C 73 nt0.4□□□□□ -2.35
RPF1P38805 tT(AGU)DtT(AGU)D 73 nt0.4□□□□□ -2.35
RPF1P38805 tT(AGU)HtT(AGU)H 73 nt0.4□□□□□ -2.35
RPF1P38805 tT(AGU)I1tT(AGU)I1 73 nt0.4□□□□□ -2.35
RPF1P38805 tT(AGU)I2tT(AGU)I2 73 nt0.4□□□□□ -2.35
RPF1P38805 tT(AGU)JtT(AGU)J 73 nt0.4□□□□□ -2.35
RPF1P38805 tT(AGU)N1tT(AGU)N1 73 nt0.4□□□□□ -2.35
RPF1P38805 tT(AGU)N2tT(AGU)N2 73 nt0.4□□□□□ -2.35
RPF1P38805 tT(AGU)O1tT(AGU)O1 73 nt0.4□□□□□ -2.35
RPF1P38805 tT(AGU)O2tT(AGU)O2 73 nt0.4□□□□□ -2.35
RPF1P38805 YIL134C-AYIL134C-A 204 nt0.4□□□□□ -2.35
RPF1P38805 YOR218CYOR218C 420 nt0.4□□□□□ -2.35
RPF1P38805 YMR160WYMR160W 2451 nt0.38□□□□□ -2.35
RPF1P38805 YIL142C-AYIL142C-A 333 nt0.38□□□□□ -2.35
RPF1P38805 YPL185WYPL185W 396 nt0.38□□□□□ -2.35
RPF1P38805 SPO21YOL091W 1830 nt0.38□□□□□ -2.35
RPF1P38805 YFR012W-AYFR012W-A 87 nt0.37□□□□□ -2.35
RPF1P38805 YLR434CYLR434C 384 nt0.37□□□□□ -2.35
RPF1P38805 YOR072W-AYOR072W-A 249 nt0.37□□□□□ -2.35
RPF1P38805 PAA1YDR071C 576 nt0.36□□□□□ -2.35
RPF1P38805 PCC1YKR095W-A 267 nt0.36□□□□□ -2.35
RPF1P38805 FMP27YLR454W 7887 nt0.36□□□□□ -2.35
RPF1P38805 FYV10YIL097W 1551 nt0.35□□□□□ -2.35
RPF1P38805 YJL127W-AYJL127W-A 117 nt0.34□□□□□ -2.36
RPF1P38805 YLR406C-AYLR406C-A 150 nt0.34□□□□□ -2.36
RPF1P38805 YNL211CYNL211C 261 nt0.34□□□□□ -2.36
RPF1P38805 YOR011W-AYOR011W-A 207 nt0.34□□□□□ -2.36
RPF1P38805 YPL068CYPL068C 882 nt0.34□□□□□ -2.36
RPF1P38805 ASE1YOR058C 2658 nt0.33□□□□□ -2.36
RPF1P38805 OST1YJL002C 1431 nt0.33□□□□□ -2.36
RPF1P38805 SBH1YER087C-B 249 nt0.33□□□□□ -2.36
RPF1P38805 YJL007CYJL007C 315 nt0.33□□□□□ -2.36
RPF1P38805 YOR053WYOR053W 342 nt0.33□□□□□ -2.36
RPF1P38805 HMRA2YCR096C 360 nt0.32□□□□□ -2.36
RPF1P38805 UTP20YBL004W 7482 nt0.31□□□□□ -2.36
RPF1P38805 PET111YMR257C 2403 nt0.31□□□□□ -2.36
RPF1P38805 YLR334CYLR334C 381 nt0.3□□□□□ -2.36
RPF1P38805 SGF11YPL047W 300 nt0.3□□□□□ -2.36
RPF1P38805 PAU12YGR294W 363 nt0.29□□□□□ -2.36
RPF1P38805 YKL063CYKL063C 504 nt0.29□□□□□ -2.36
RPF1P38805 VPS20YMR077C 666 nt0.29□□□□□ -2.36
RPF1P38805 YMR321CYMR321C 318 nt0.29□□□□□ -2.36
RPF1P38805 YPR160W-AYPR160W-A 81 nt0.29□□□□□ -2.36
RPF1P38805 YOR192C-BYOR192C-B 5313 nt0.28□□□□□ -2.36
RPF1P38805 CSN9YDR179C 489 nt0.28□□□□□ -2.36
RPF1P38805 COX5BYIL111W 456 nt0.28□□□□□ -2.36
RPF1P38805 RPS25BYLR333C 327 nt0.28□□□□□ -2.36
RPF1P38805 YPL205CYPL205C 345 nt0.28□□□□□ -2.36
RPF1P38805 SEC8YPR055W 3198 nt0.27□□□□□ -2.37
RPF1P38805 YHL046W-AYHL046W-A 327 nt0.27□□□□□ -2.37
RPF1P38805 TAR1YLR154W-C 375 nt0.27□□□□□ -2.37
RPF1P38805 YPL225WYPL225W 441 nt0.27□□□□□ -2.37
RPF1P38805 INA22YIR024C 651 nt0.26□□□□□ -2.37
RPF1P38805 YAR029WYAR029W 225 nt0.26□□□□□ -2.37
RPF1P38805 ABF2YMR072W 552 nt0.26□□□□□ -2.37
RPF1P38805 VIK1YPL253C 1944 nt0.26□□□□□ -2.37
RPF1P38805 PRP5YBR237W 2550 nt0.26□□□□□ -2.37
RPF1P38805 YSP1YHR155W 3687 nt0.26□□□□□ -2.37
RPF1P38805 OST4YDL232W 111 nt0.25□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms