Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH3P22223 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH3P22223 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CDH3P22223 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.61■□□□□ 0.73
CDH3P22223 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH3P22223 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH3P22223 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH3P22223 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH3P22223 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH3P22223 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH3P22223 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH3P22223 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH3P22223 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDH3P22223 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH3P22223 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH3P22223 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH3P22223 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH3P22223 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH3P22223 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CDH3P22223 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH3P22223 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH3P22223 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CDH3P22223 AC027702.1-201ENST00000563810 1770 ntBASIC19.6■□□□□ 0.73
CDH3P22223 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CDH3P22223 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH3P22223 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH3P22223 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH3P22223 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH3P22223 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH3P22223 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CDH3P22223 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH3P22223 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH3P22223 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH3P22223 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH3P22223 POU5F1P3-201ENST00000428824 1078 ntBASIC19.59■□□□□ 0.73
CDH3P22223 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH3P22223 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
CDH3P22223 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH3P22223 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH3P22223 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH3P22223 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH3P22223 C2orf69P4-201ENST00000565394 541 ntBASIC19.59■□□□□ 0.73
CDH3P22223 AC060766.5-201ENST00000590539 871 ntBASIC19.59■□□□□ 0.73
CDH3P22223 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH3P22223 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH3P22223 HLA-B-256ENST00000639848 1089 ntBASIC19.59■□□□□ 0.73
CDH3P22223 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
CDH3P22223 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH3P22223 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDH3P22223 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH3P22223 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH3P22223 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH3P22223 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH3P22223 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH3P22223 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDH3P22223 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.58■□□□□ 0.73
CDH3P22223 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDH3P22223 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDH3P22223 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH3P22223 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDH3P22223 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH3P22223 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.73
CDH3P22223 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH3P22223 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH3P22223 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CDH3P22223 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.58■□□□□ 0.72
CDH3P22223 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.58■□□□□ 0.72
CDH3P22223 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.58■□□□□ 0.72
CDH3P22223 TMEM191A-211ENST00000637163 1067 ntBASIC19.58■□□□□ 0.72
CDH3P22223 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDH3P22223 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH3P22223 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH3P22223 AL020996.1-203ENST00000536896 2307 ntBASIC19.58■□□□□ 0.72
CDH3P22223 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
CDH3P22223 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.58■□□□□ 0.72
CDH3P22223 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.58■□□□□ 0.72
CDH3P22223 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH3P22223 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDH3P22223 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
CDH3P22223 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH3P22223 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CDH3P22223 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH3P22223 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH3P22223 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDH3P22223 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH3P22223 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CDH3P22223 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH3P22223 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
CDH3P22223 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH3P22223 AC092368.3-202ENST00000574180 1591 ntBASIC19.57■□□□□ 0.72
CDH3P22223 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH3P22223 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH3P22223 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH3P22223 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDH3P22223 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH3P22223 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH3P22223 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CDH3P22223 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH3P22223 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDH3P22223 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms