Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRKCAP17252 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRKCAP17252 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRKCAP17252 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PRKCAP17252 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRKCAP17252 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRKCAP17252 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRKCAP17252 AL512625.2-201ENST00000417533 625 ntBASIC18.53■□□□□ 0.56
PRKCAP17252 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.53■□□□□ 0.56
PRKCAP17252 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.53■□□□□ 0.56
PRKCAP17252 AC093787.1-201ENST00000450396 207 ntBASIC18.53■□□□□ 0.56
PRKCAP17252 AC087633.2-202ENST00000565166 1439 ntBASIC18.53■□□□□ 0.56
PRKCAP17252 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
PRKCAP17252 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PRKCAP17252 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRKCAP17252 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PRKCAP17252 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRKCAP17252 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRKCAP17252 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRKCAP17252 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.53■□□□□ 0.56
PRKCAP17252 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.52■□□□□ 0.56
PRKCAP17252 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PRKCAP17252 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRKCAP17252 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.52■□□□□ 0.56
PRKCAP17252 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRKCAP17252 MCRIP2P1-201ENST00000394346 511 ntBASIC18.52■□□□□ 0.56
PRKCAP17252 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.52■□□□□ 0.56
PRKCAP17252 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRKCAP17252 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.52■□□□□ 0.56
PRKCAP17252 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRKCAP17252 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.52■□□□□ 0.56
PRKCAP17252 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.52■□□□□ 0.56
PRKCAP17252 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.52■□□□□ 0.56
PRKCAP17252 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRKCAP17252 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.52■□□□□ 0.56
PRKCAP17252 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRKCAP17252 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRKCAP17252 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PRKCAP17252 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PRKCAP17252 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRKCAP17252 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.52■□□□□ 0.55
PRKCAP17252 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRKCAP17252 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PRKCAP17252 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRKCAP17252 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PRKCAP17252 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRKCAP17252 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PRKCAP17252 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRKCAP17252 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PRKCAP17252 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRKCAP17252 AC010980.2-201ENST00000587099 1412 ntBASIC18.51■□□□□ 0.55
PRKCAP17252 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRKCAP17252 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRKCAP17252 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRKCAP17252 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRKCAP17252 PGM5P4-201ENST00000421970 445 ntBASIC18.51■□□□□ 0.55
PRKCAP17252 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.51■□□□□ 0.55
PRKCAP17252 AC090192.1-201ENST00000517740 490 ntBASIC18.51■□□□□ 0.55
PRKCAP17252 AF201337.1-201ENST00000520239 748 ntBASIC18.51■□□□□ 0.55
PRKCAP17252 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.51■□□□□ 0.55
PRKCAP17252 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PRKCAP17252 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
PRKCAP17252 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.51■□□□□ 0.55
PRKCAP17252 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.51■□□□□ 0.55
PRKCAP17252 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.51■□□□□ 0.55
PRKCAP17252 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRKCAP17252 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRKCAP17252 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.5■□□□□ 0.55
PRKCAP17252 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
PRKCAP17252 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.5■□□□□ 0.55
PRKCAP17252 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PRKCAP17252 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRKCAP17252 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRKCAP17252 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.5■□□□□ 0.55
PRKCAP17252 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.5■□□□□ 0.55
PRKCAP17252 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.5■□□□□ 0.55
PRKCAP17252 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.5■□□□□ 0.55
PRKCAP17252 AC105036.2-201ENST00000569468 176 ntBASIC18.5■□□□□ 0.55
PRKCAP17252 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.5■□□□□ 0.55
PRKCAP17252 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.5■□□□□ 0.55
PRKCAP17252 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRKCAP17252 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRKCAP17252 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PRKCAP17252 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.5■□□□□ 0.55
PRKCAP17252 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRKCAP17252 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
PRKCAP17252 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
PRKCAP17252 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRKCAP17252 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PRKCAP17252 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRKCAP17252 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.49■□□□□ 0.55
PRKCAP17252 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.49■□□□□ 0.55
PRKCAP17252 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 KRT8P36-201ENST00000489121 1440 ntBASIC18.49■□□□□ 0.55
PRKCAP17252 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRKCAP17252 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms