Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 SLC7A5P1-201ENST00000568957 537 ntBASIC17.17■□□□□ 0.34
VSIG8P0DPA2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 MIR6821-201ENST00000617625 74 ntBASIC17.17■□□□□ 0.34
VSIG8P0DPA2 AP000974.1-201ENST00000623909 2387 ntBASIC17.17■□□□□ 0.34
VSIG8P0DPA2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VSIG8P0DPA2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 AC093484.2-201ENST00000580996 2166 ntBASIC17.16■□□□□ 0.34
VSIG8P0DPA2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VSIG8P0DPA2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 TERF1P2-201ENST00000583350 1212 ntBASIC17.15■□□□□ 0.34
VSIG8P0DPA2 AC087623.3-201ENST00000607047 1098 ntBASIC17.15■□□□□ 0.34
VSIG8P0DPA2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VSIG8P0DPA2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 CDV3P1-201ENST00000471403 739 ntBASIC17.14■□□□□ 0.33
VSIG8P0DPA2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VSIG8P0DPA2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 AC123595.1-201ENST00000440769 1046 ntBASIC17.13■□□□□ 0.33
VSIG8P0DPA2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSIG8P0DPA2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms