Protein–RNA interactions for Protein: P0CG63

UBI4, Polyubiquitin, yeastyeast

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBI4P0CG63 PRP5YBR237W 2550 nt-0.07□□□□□ -2.42
UBI4P0CG63 snR72snR72 98 nt-0.08□□□□□ -2.42
UBI4P0CG63 YKL044WYKL044W 321 nt-0.08□□□□□ -2.42
UBI4P0CG63 YOR053WYOR053W 342 nt-0.08□□□□□ -2.42
UBI4P0CG63 COG8YML071C 1824 nt-0.08□□□□□ -2.42
UBI4P0CG63 SPO21YOL091W 1830 nt-0.08□□□□□ -2.42
UBI4P0CG63 MYO1YHR023W 5787 nt-0.08□□□□□ -2.42
UBI4P0CG63 YBL008W-AYBL008W-A 240 nt-0.09□□□□□ -2.42
UBI4P0CG63 YPR160W-AYPR160W-A 81 nt-0.09□□□□□ -2.42
UBI4P0CG63 OST4YDL232W 111 nt-0.1□□□□□ -2.43
UBI4P0CG63 YKL023C-AYKL023C-A 228 nt-0.1□□□□□ -2.43
UBI4P0CG63 SEC8YPR055W 3198 nt-0.1□□□□□ -2.43
UBI4P0CG63 PTP2YOR208W 2253 nt-0.11□□□□□ -2.43
UBI4P0CG63 EMC4YGL231C 573 nt-0.11□□□□□ -2.43
UBI4P0CG63 STE5YDR103W 2754 nt-0.11□□□□□ -2.43
UBI4P0CG63 snR190snR190 190 nt-0.12□□□□□ -2.43
UBI4P0CG63 SNU56YDR240C 1479 nt-0.13□□□□□ -2.43
UBI4P0CG63 TIM13YGR181W 318 nt-0.13□□□□□ -2.43
UBI4P0CG63 SVS1YPL163C 783 nt-0.13□□□□□ -2.43
UBI4P0CG63 TSC3YBR058C-A 243 nt-0.13□□□□□ -2.43
UBI4P0CG63 YDL016CYDL016C 303 nt-0.14□□□□□ -2.43
UBI4P0CG63 YAL067W-AYAL067W-A 228 nt-0.14□□□□□ -2.43
UBI4P0CG63 YLR232WYLR232W 348 nt-0.14□□□□□ -2.43
UBI4P0CG63 YLR399W-AYLR399W-A 105 nt-0.14□□□□□ -2.43
UBI4P0CG63 BER1YLR412W 825 nt-0.14□□□□□ -2.43
UBI4P0CG63 snR51snR51 107 nt-0.14□□□□□ -2.43
UBI4P0CG63 ORC3YLL004W 1851 nt-0.15□□□□□ -2.43
UBI4P0CG63 RPL35AYDL191W 363 nt-0.15□□□□□ -2.43
UBI4P0CG63 YFR012W-AYFR012W-A 87 nt-0.15□□□□□ -2.43
UBI4P0CG63 MRPL50YNR022C 420 nt-0.15□□□□□ -2.43
UBI4P0CG63 YOR186C-AYOR186C-A 210 nt-0.15□□□□□ -2.43
UBI4P0CG63 YBR206WYBR206W 324 nt-0.15□□□□□ -2.43
UBI4P0CG63 ASE1YOR058C 2658 nt-0.15□□□□□ -2.43
UBI4P0CG63 RCO1YMR075W 2055 nt-0.15□□□□□ -2.43
UBI4P0CG63 HMLALPHA2YCL067C 633 nt-0.16□□□□□ -2.44
UBI4P0CG63 MATALPHA2YCR039C 633 nt-0.16□□□□□ -2.44
UBI4P0CG63 SSS1YDR086C 243 nt-0.16□□□□□ -2.44
UBI4P0CG63 WIP1YDR374W-A 270 nt-0.16□□□□□ -2.44
UBI4P0CG63 YML108WYML108W 318 nt-0.16□□□□□ -2.44
UBI4P0CG63 YMR321CYMR321C 318 nt-0.16□□□□□ -2.44
UBI4P0CG63 DCP1YOL149W 696 nt-0.16□□□□□ -2.44
UBI4P0CG63 YDR371C-AYDR371C-A 105 nt-0.17□□□□□ -2.44
UBI4P0CG63 HAL9YOL089C 3093 nt-0.17□□□□□ -2.44
UBI4P0CG63 YCR001WYCR001W 315 nt-0.18□□□□□ -2.44
UBI4P0CG63 ULI1YFR026C 510 nt-0.19□□□□□ -2.44
UBI4P0CG63 MAM33YIL070C 801 nt-0.19□□□□□ -2.44
UBI4P0CG63 SDH7YDR511W 402 nt-0.2□□□□□ -2.44
UBI4P0CG63 RPS26AYGL189C 360 nt-0.2□□□□□ -2.44
UBI4P0CG63 RPS20YHL015W 366 nt-0.2□□□□□ -2.44
UBI4P0CG63 NFU1YKL040C 771 nt-0.2□□□□□ -2.44
UBI4P0CG63 GRX5YPL059W 453 nt-0.2□□□□□ -2.44
UBI4P0CG63 tF(GAA)BtF(GAA)B 73 nt-0.21□□□□□ -2.44
UBI4P0CG63 tF(GAA)FtF(GAA)F 73 nt-0.21□□□□□ -2.44
UBI4P0CG63 tF(GAA)GtF(GAA)G 73 nt-0.21□□□□□ -2.44
UBI4P0CG63 tF(GAA)H1tF(GAA)H1 73 nt-0.21□□□□□ -2.44
UBI4P0CG63 tF(GAA)H2tF(GAA)H2 73 nt-0.21□□□□□ -2.44
UBI4P0CG63 tF(GAA)MtF(GAA)M 73 nt-0.21□□□□□ -2.44
UBI4P0CG63 tF(GAA)P1tF(GAA)P1 73 nt-0.21□□□□□ -2.44
UBI4P0CG63 tF(GAA)P2tF(GAA)P2 73 nt-0.21□□□□□ -2.44
UBI4P0CG63 YHL046W-AYHL046W-A 327 nt-0.21□□□□□ -2.44
UBI4P0CG63 YJR011CYJR011C 786 nt-0.21□□□□□ -2.44
UBI4P0CG63 SEM1YDR363W-A 270 nt-0.22□□□□□ -2.44
UBI4P0CG63 YFR009W-AYFR009W-A 258 nt-0.22□□□□□ -2.44
UBI4P0CG63 YJR141WYJR141W 1044 nt-0.22□□□□□ -2.44
UBI4P0CG63 LEE1YPL054W 906 nt-0.22□□□□□ -2.44
UBI4P0CG63 YNL146WYNL146W 303 nt-0.23□□□□□ -2.45
UBI4P0CG63 YNL211CYNL211C 261 nt-0.23□□□□□ -2.45
UBI4P0CG63 NNF2YGR089W 2811 nt-0.23□□□□□ -2.45
UBI4P0CG63 STF2YGR008C 255 nt-0.24□□□□□ -2.45
UBI4P0CG63 snR45snR45 172 nt-0.24□□□□□ -2.45
UBI4P0CG63 YLR171WYLR171W 390 nt-0.25□□□□□ -2.45
UBI4P0CG63 YNL058CYNL058C 951 nt-0.25□□□□□ -2.45
UBI4P0CG63 YOR345CYOR345C 351 nt-0.25□□□□□ -2.45
UBI4P0CG63 ATG31YDR022C 591 nt-0.26□□□□□ -2.45
UBI4P0CG63 RPF1YHR088W 888 nt-0.26□□□□□ -2.45
UBI4P0CG63 YDL011CYDL011C 324 nt-0.27□□□□□ -2.45
UBI4P0CG63 YER078W-AYER078W-A 165 nt-0.27□□□□□ -2.45
UBI4P0CG63 YJL020W-AYJL020W-A 258 nt-0.27□□□□□ -2.45
UBI4P0CG63 YJL047C-AYJL047C-A 135 nt-0.27□□□□□ -2.45
UBI4P0CG63 YPL229WYPL229W 621 nt-0.3□□□□□ -2.46
UBI4P0CG63 NIP100YPL174C 2607 nt-0.31□□□□□ -2.46
UBI4P0CG63 YHL041WYHL041W 450 nt-0.31□□□□□ -2.46
UBI4P0CG63 YBL071CYBL071C 309 nt-0.31□□□□□ -2.46
UBI4P0CG63 NIP1YMR309C 2439 nt-0.31□□□□□ -2.46
UBI4P0CG63 YKU70YMR284W 1809 nt-0.31□□□□□ -2.46
UBI4P0CG63 YOL014WYOL014W 375 nt-0.33□□□□□ -2.46
UBI4P0CG63 THO2YNL139C 4794 nt-0.33□□□□□ -2.46
UBI4P0CG63 tN(GUU)QtN(GUU)Q 71 nt-0.34□□□□□ -2.46
UBI4P0CG63 YLR269CYLR269C 351 nt-0.34□□□□□ -2.46
UBI4P0CG63 HUG1YML058W-A 207 nt-0.34□□□□□ -2.46
UBI4P0CG63 YOR011W-AYOR011W-A 207 nt-0.34□□□□□ -2.46
UBI4P0CG63 YLR285C-AYLR285C-A 171 nt-0.35□□□□□ -2.47
UBI4P0CG63 YMR307C-AYMR307C-A 195 nt-0.35□□□□□ -2.47
UBI4P0CG63 COY1YKL179C 2040 nt-0.36□□□□□ -2.47
UBI4P0CG63 YKL136WYKL136W 399 nt-0.36□□□□□ -2.47
UBI4P0CG63 SOV1YMR066W 2697 nt-0.36□□□□□ -2.47
UBI4P0CG63 Q0255Q0255 1419 nt-0.37□□□□□ -2.47
UBI4P0CG63 YCR018C-AYCR018C-A 255 nt-0.37□□□□□ -2.47
UBI4P0CG63 snR8snR8 190 nt-0.37□□□□□ -2.47
UBI4P0CG63 YLR287CYLR287C 1068 nt-0.37□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 10.8 ms