Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SNRPA1P09661 KRT8P17-201ENST00000453110 1448 ntBASIC25.71■■□□□ 1.71
SNRPA1P09661 AC026310.3-201ENST00000625186 2373 ntBASIC25.71■■□□□ 1.71
SNRPA1P09661 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNRPA1P09661 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
SNRPA1P09661 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SNRPA1P09661 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNRPA1P09661 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
SNRPA1P09661 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC25.71■■□□□ 1.71
SNRPA1P09661 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.71■■□□□ 1.71
SNRPA1P09661 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.71■■□□□ 1.71
SNRPA1P09661 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.71■■□□□ 1.71
SNRPA1P09661 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.71■■□□□ 1.71
SNRPA1P09661 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNRPA1P09661 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.71■■□□□ 1.71
SNRPA1P09661 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNRPA1P09661 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.71■■□□□ 1.71
SNRPA1P09661 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SNRPA1P09661 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.71■■□□□ 1.71
SNRPA1P09661 AC006128.1-201ENST00000624704 1661 ntBASIC25.71■■□□□ 1.71
SNRPA1P09661 AC005229.4-201ENST00000610085 2198 ntBASIC25.71■■□□□ 1.71
SNRPA1P09661 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SNRPA1P09661 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC25.7■■□□□ 1.71
SNRPA1P09661 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.7■■□□□ 1.71
SNRPA1P09661 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.7■■□□□ 1.7
SNRPA1P09661 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
SNRPA1P09661 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.7■■□□□ 1.7
SNRPA1P09661 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.7■■□□□ 1.7
SNRPA1P09661 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SNRPA1P09661 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.7■■□□□ 1.7
SNRPA1P09661 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SNRPA1P09661 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.7■■□□□ 1.7
SNRPA1P09661 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNRPA1P09661 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC25.69■■□□□ 1.7
SNRPA1P09661 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.69■■□□□ 1.7
SNRPA1P09661 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNRPA1P09661 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SNRPA1P09661 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNRPA1P09661 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNRPA1P09661 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SNRPA1P09661 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SNRPA1P09661 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNRPA1P09661 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.69■■□□□ 1.7
SNRPA1P09661 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SNRPA1P09661 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNRPA1P09661 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.69■■□□□ 1.7
SNRPA1P09661 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.69■■□□□ 1.7
SNRPA1P09661 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SNRPA1P09661 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNRPA1P09661 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNRPA1P09661 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNRPA1P09661 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SNRPA1P09661 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNRPA1P09661 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNRPA1P09661 AL353807.1-201ENST00000427475 662 ntBASIC25.68■■□□□ 1.7
SNRPA1P09661 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SNRPA1P09661 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SNRPA1P09661 AL355075.4-201ENST00000554988 638 ntBASIC25.68■■□□□ 1.7
SNRPA1P09661 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.68■■□□□ 1.7
SNRPA1P09661 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC25.68■■□□□ 1.7
SNRPA1P09661 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.68■■□□□ 1.7
SNRPA1P09661 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNRPA1P09661 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.67■■□□□ 1.7
SNRPA1P09661 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SNRPA1P09661 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SNRPA1P09661 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
SNRPA1P09661 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.67■■□□□ 1.7
SNRPA1P09661 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC25.67■■□□□ 1.7
SNRPA1P09661 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.67■■□□□ 1.7
SNRPA1P09661 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.67■■□□□ 1.7
SNRPA1P09661 AC004264.1-201ENST00000608354 794 ntBASIC25.67■■□□□ 1.7
SNRPA1P09661 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
SNRPA1P09661 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SNRPA1P09661 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
SNRPA1P09661 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNRPA1P09661 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNRPA1P09661 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNRPA1P09661 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC25.66■■□□□ 1.7
SNRPA1P09661 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC25.66■■□□□ 1.7
SNRPA1P09661 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC25.66■■□□□ 1.7
SNRPA1P09661 AC026471.5-201ENST00000615068 467 ntBASIC25.66■■□□□ 1.7
SNRPA1P09661 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNRPA1P09661 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SNRPA1P09661 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.66■■□□□ 1.7
SNRPA1P09661 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SNRPA1P09661 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.65■■□□□ 1.7
SNRPA1P09661 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SNRPA1P09661 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
SNRPA1P09661 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
SNRPA1P09661 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SNRPA1P09661 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
SNRPA1P09661 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
SNRPA1P09661 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SNRPA1P09661 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC25.65■■□□□ 1.7
SNRPA1P09661 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC25.65■■□□□ 1.7
SNRPA1P09661 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.65■■□□□ 1.7
SNRPA1P09661 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.65■■□□□ 1.7
SNRPA1P09661 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.65■■□□□ 1.7
SNRPA1P09661 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.65■■□□□ 1.7
SNRPA1P09661 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms