Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.83■□□□□ 0.93
CD48P09326 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD48P09326 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.83■□□□□ 0.92
CD48P09326 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD48P09326 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.82■□□□□ 0.92
CD48P09326 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD48P09326 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.82■□□□□ 0.92
CD48P09326 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.82■□□□□ 0.92
CD48P09326 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.82■□□□□ 0.92
CD48P09326 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.82■□□□□ 0.92
CD48P09326 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.82■□□□□ 0.92
CD48P09326 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD48P09326 AC105036.2-201ENST00000569468 176 ntBASIC20.82■□□□□ 0.92
CD48P09326 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD48P09326 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CD48P09326 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.81■□□□□ 0.92
CD48P09326 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD48P09326 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.81■□□□□ 0.92
CD48P09326 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD48P09326 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD48P09326 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.81■□□□□ 0.92
CD48P09326 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD48P09326 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD48P09326 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CD48P09326 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.81■□□□□ 0.92
CD48P09326 AL589743.5-201ENST00000616611 1050 ntBASIC20.81■□□□□ 0.92
CD48P09326 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD48P09326 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD48P09326 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD48P09326 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.81■□□□□ 0.92
CD48P09326 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD48P09326 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CD48P09326 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD48P09326 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD48P09326 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CD48P09326 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD48P09326 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD48P09326 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CD48P09326 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CD48P09326 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.8■□□□□ 0.92
CD48P09326 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CD48P09326 AF201337.1-201ENST00000520239 748 ntBASIC20.8■□□□□ 0.92
CD48P09326 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.8■□□□□ 0.92
CD48P09326 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.8■□□□□ 0.92
CD48P09326 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD48P09326 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD48P09326 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD48P09326 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD48P09326 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD48P09326 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CD48P09326 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD48P09326 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD48P09326 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CD48P09326 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD48P09326 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.79■□□□□ 0.92
CD48P09326 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CD48P09326 MKRN4P-201ENST00000444706 1521 ntBASIC20.79■□□□□ 0.92
CD48P09326 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.79■□□□□ 0.92
CD48P09326 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CD48P09326 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD48P09326 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD48P09326 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD48P09326 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD48P09326 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD48P09326 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.79■□□□□ 0.92
CD48P09326 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.79■□□□□ 0.92
CD48P09326 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CD48P09326 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CD48P09326 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD48P09326 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.79■□□□□ 0.92
CD48P09326 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CD48P09326 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.78■□□□□ 0.92
CD48P09326 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CD48P09326 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.78■□□□□ 0.92
CD48P09326 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD48P09326 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.78■□□□□ 0.92
CD48P09326 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.78■□□□□ 0.92
CD48P09326 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD48P09326 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.77■□□□□ 0.92
CD48P09326 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD48P09326 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD48P09326 RNF165-205ENST00000588679 2904 ntBASIC20.77■□□□□ 0.92
CD48P09326 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CD48P09326 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.77■□□□□ 0.92
CD48P09326 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms