Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.49■□□□□ 0.55
THBS1P07996 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
THBS1P07996 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THBS1P07996 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THBS1P07996 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.48■□□□□ 0.55
THBS1P07996 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
THBS1P07996 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.48■□□□□ 0.55
THBS1P07996 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THBS1P07996 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THBS1P07996 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.48■□□□□ 0.55
THBS1P07996 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.48■□□□□ 0.55
THBS1P07996 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THBS1P07996 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.48■□□□□ 0.55
THBS1P07996 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
THBS1P07996 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
THBS1P07996 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
THBS1P07996 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
THBS1P07996 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
THBS1P07996 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
THBS1P07996 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THBS1P07996 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.48■□□□□ 0.55
THBS1P07996 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THBS1P07996 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
THBS1P07996 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
THBS1P07996 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
THBS1P07996 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
THBS1P07996 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.47■□□□□ 0.55
THBS1P07996 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
THBS1P07996 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.47■□□□□ 0.55
THBS1P07996 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
THBS1P07996 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
THBS1P07996 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.47■□□□□ 0.55
THBS1P07996 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.47■□□□□ 0.55
THBS1P07996 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
THBS1P07996 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.47■□□□□ 0.55
THBS1P07996 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
THBS1P07996 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
THBS1P07996 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
THBS1P07996 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THBS1P07996 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
THBS1P07996 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THBS1P07996 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THBS1P07996 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THBS1P07996 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.46■□□□□ 0.55
THBS1P07996 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THBS1P07996 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
THBS1P07996 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
THBS1P07996 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
THBS1P07996 AL512625.2-201ENST00000417533 625 ntBASIC18.46■□□□□ 0.55
THBS1P07996 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.46■□□□□ 0.55
THBS1P07996 AL031963.3-201ENST00000606441 850 ntBASIC18.46■□□□□ 0.55
THBS1P07996 AL589743.5-201ENST00000616611 1050 ntBASIC18.46■□□□□ 0.55
THBS1P07996 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THBS1P07996 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
THBS1P07996 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THBS1P07996 KRT8P17-201ENST00000453110 1448 ntBASIC18.46■□□□□ 0.55
THBS1P07996 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.46■□□□□ 0.55
THBS1P07996 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
THBS1P07996 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
THBS1P07996 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.46■□□□□ 0.55
THBS1P07996 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
THBS1P07996 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
THBS1P07996 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
THBS1P07996 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
THBS1P07996 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.46■□□□□ 0.54
THBS1P07996 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
THBS1P07996 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.46■□□□□ 0.54
THBS1P07996 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
THBS1P07996 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THBS1P07996 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THBS1P07996 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
THBS1P07996 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
THBS1P07996 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
THBS1P07996 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THBS1P07996 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THBS1P07996 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
THBS1P07996 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THBS1P07996 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
THBS1P07996 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.45■□□□□ 0.54
THBS1P07996 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.45■□□□□ 0.54
THBS1P07996 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.45■□□□□ 0.54
THBS1P07996 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.45■□□□□ 0.54
THBS1P07996 AC010980.2-201ENST00000587099 1412 ntBASIC18.45■□□□□ 0.54
THBS1P07996 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.45■□□□□ 0.54
THBS1P07996 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.45■□□□□ 0.54
THBS1P07996 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
THBS1P07996 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.45■□□□□ 0.54
THBS1P07996 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THBS1P07996 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
THBS1P07996 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THBS1P07996 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.44■□□□□ 0.54
THBS1P07996 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
THBS1P07996 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.44■□□□□ 0.54
THBS1P07996 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.44■□□□□ 0.54
THBS1P07996 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms