Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC24.34■■□□□ 1.49
COL1A1P02452 AC097493.4-201ENST00000641197 219 ntBASIC24.34■■□□□ 1.49
COL1A1P02452 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL1A1P02452 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
COL1A1P02452 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL1A1P02452 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.33■■□□□ 1.49
COL1A1P02452 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL1A1P02452 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC24.33■■□□□ 1.49
COL1A1P02452 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC24.33■■□□□ 1.49
COL1A1P02452 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC24.33■■□□□ 1.49
COL1A1P02452 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.33■■□□□ 1.49
COL1A1P02452 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL1A1P02452 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL1A1P02452 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL1A1P02452 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
COL1A1P02452 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
COL1A1P02452 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL1A1P02452 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL1A1P02452 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL1A1P02452 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC24.32■■□□□ 1.48
COL1A1P02452 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC24.32■■□□□ 1.48
COL1A1P02452 AL355075.4-201ENST00000554988 638 ntBASIC24.32■■□□□ 1.48
COL1A1P02452 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.32■■□□□ 1.48
COL1A1P02452 AL031963.3-201ENST00000606441 850 ntBASIC24.32■■□□□ 1.48
COL1A1P02452 AL121829.2-201ENST00000620908 328 ntBASIC24.32■■□□□ 1.48
COL1A1P02452 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL1A1P02452 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL1A1P02452 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL1A1P02452 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL1A1P02452 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL1A1P02452 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.32■■□□□ 1.48
COL1A1P02452 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL1A1P02452 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.32■■□□□ 1.48
COL1A1P02452 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL1A1P02452 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC24.32■■□□□ 1.48
COL1A1P02452 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.32■■□□□ 1.48
COL1A1P02452 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL1A1P02452 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.32■■□□□ 1.48
COL1A1P02452 CABP2-204ENST00000636477 941 ntTSL 5 BASIC24.32■■□□□ 1.48
COL1A1P02452 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC24.31■■□□□ 1.48
COL1A1P02452 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.31■■□□□ 1.48
COL1A1P02452 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL1A1P02452 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.31■■□□□ 1.48
COL1A1P02452 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
COL1A1P02452 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
COL1A1P02452 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.31■■□□□ 1.48
COL1A1P02452 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
COL1A1P02452 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.31■■□□□ 1.48
COL1A1P02452 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL1A1P02452 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC24.31■■□□□ 1.48
COL1A1P02452 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL1A1P02452 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC24.31■■□□□ 1.48
COL1A1P02452 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.31■■□□□ 1.48
COL1A1P02452 AC133561.5-201ENST00000635547 218 ntBASIC24.31■■□□□ 1.48
COL1A1P02452 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL1A1P02452 AC007225.1-201ENST00000566331 1836 ntBASIC24.31■■□□□ 1.48
COL1A1P02452 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.31■■□□□ 1.48
COL1A1P02452 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
COL1A1P02452 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
COL1A1P02452 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL1A1P02452 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.3■■□□□ 1.48
COL1A1P02452 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
COL1A1P02452 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL1A1P02452 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL1A1P02452 PENK-204ENST00000518770 863 ntTSL 2 BASIC24.3■■□□□ 1.48
COL1A1P02452 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC24.3■■□□□ 1.48
COL1A1P02452 PRKY-204ENST00000533551 1019 ntBASIC24.3■■□□□ 1.48
COL1A1P02452 PPOX-219ENST00000544598 813 ntTSL 2 BASIC24.3■■□□□ 1.48
COL1A1P02452 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.3■■□□□ 1.48
COL1A1P02452 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC24.3■■□□□ 1.48
COL1A1P02452 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
COL1A1P02452 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL1A1P02452 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
COL1A1P02452 AC007375.3-201ENST00000600936 2314 ntBASIC24.29■■□□□ 1.48
COL1A1P02452 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL1A1P02452 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL1A1P02452 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.29■■□□□ 1.48
COL1A1P02452 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.29■■□□□ 1.48
COL1A1P02452 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC24.29■■□□□ 1.48
COL1A1P02452 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL1A1P02452 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.29■■□□□ 1.48
COL1A1P02452 AL121906.2-201ENST00000621597 723 ntBASIC24.29■■□□□ 1.48
COL1A1P02452 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.29■■□□□ 1.48
COL1A1P02452 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
COL1A1P02452 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.28■■□□□ 1.48
COL1A1P02452 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL1A1P02452 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC24.28■■□□□ 1.48
COL1A1P02452 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL1A1P02452 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL1A1P02452 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.28■■□□□ 1.48
COL1A1P02452 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL1A1P02452 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC24.28■■□□□ 1.48
COL1A1P02452 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
COL1A1P02452 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL1A1P02452 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
COL1A1P02452 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.28■■□□□ 1.48
COL1A1P02452 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL1A1P02452 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL1A1P02452 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.28■■□□□ 1.48
COL1A1P02452 DPP3P2-201ENST00000416030 1696 ntBASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms