Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDH8O95206 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDH8O95206 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH8O95206 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH8O95206 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH8O95206 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH8O95206 AC239809.2-201ENST00000415381 517 ntBASIC20.09■□□□□ 0.81
PCDH8O95206 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDH8O95206 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH8O95206 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDH8O95206 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
PCDH8O95206 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
PCDH8O95206 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH8O95206 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH8O95206 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDH8O95206 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH8O95206 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH8O95206 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH8O95206 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH8O95206 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH8O95206 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH8O95206 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
PCDH8O95206 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PCDH8O95206 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDH8O95206 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDH8O95206 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDH8O95206 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH8O95206 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDH8O95206 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
PCDH8O95206 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDH8O95206 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH8O95206 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH8O95206 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PCDH8O95206 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
PCDH8O95206 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDH8O95206 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH8O95206 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH8O95206 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH8O95206 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH8O95206 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDH8O95206 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDH8O95206 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PCDH8O95206 MIR718-201ENST00000390190 70 ntBASIC20.07■□□□□ 0.8
PCDH8O95206 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH8O95206 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDH8O95206 PRKY-204ENST00000533551 1019 ntBASIC20.07■□□□□ 0.8
PCDH8O95206 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDH8O95206 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDH8O95206 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.07■□□□□ 0.8
PCDH8O95206 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PCDH8O95206 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH8O95206 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH8O95206 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDH8O95206 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH8O95206 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDH8O95206 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH8O95206 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDH8O95206 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH8O95206 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PCDH8O95206 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH8O95206 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH8O95206 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH8O95206 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH8O95206 HLA-G-202ENST00000376815 851 ntBASIC20.06■□□□□ 0.8
PCDH8O95206 HLA-G-203ENST00000376818 1127 ntBASIC20.06■□□□□ 0.8
PCDH8O95206 KRASP1-201ENST00000407852 552 ntBASIC20.06■□□□□ 0.8
PCDH8O95206 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PCDH8O95206 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH8O95206 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDH8O95206 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDH8O95206 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH8O95206 AC124016.1-201ENST00000609552 612 ntBASIC20.06■□□□□ 0.8
PCDH8O95206 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH8O95206 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH8O95206 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
PCDH8O95206 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH8O95206 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PCDH8O95206 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH8O95206 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH8O95206 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH8O95206 AC124283.5-201ENST00000624661 1809 ntBASIC20.05■□□□□ 0.8
PCDH8O95206 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PCDH8O95206 AL596275.1-201ENST00000423464 877 ntBASIC20.05■□□□□ 0.8
PCDH8O95206 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH8O95206 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDH8O95206 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDH8O95206 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH8O95206 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH8O95206 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH8O95206 AC007225.1-201ENST00000566331 1836 ntBASIC20.04■□□□□ 0.8
PCDH8O95206 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
PCDH8O95206 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH8O95206 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.04■□□□□ 0.8
PCDH8O95206 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDH8O95206 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH8O95206 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDH8O95206 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.04■□□□□ 0.8
PCDH8O95206 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH8O95206 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH8O95206 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms