Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.56■□□□□ 0.56
NKX2-2O95096 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.56■□□□□ 0.56
NKX2-2O95096 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NKX2-2O95096 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NKX2-2O95096 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NKX2-2O95096 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.56■□□□□ 0.56
NKX2-2O95096 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.56■□□□□ 0.56
NKX2-2O95096 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 DUSP5P2-201ENST00000426873 1033 ntBASIC18.56■□□□□ 0.56
NKX2-2O95096 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.56■□□□□ 0.56
NKX2-2O95096 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.56■□□□□ 0.56
NKX2-2O95096 MIR4758-201ENST00000577688 71 ntBASIC18.56■□□□□ 0.56
NKX2-2O95096 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.56■□□□□ 0.56
NKX2-2O95096 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.56■□□□□ 0.56
NKX2-2O95096 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.56■□□□□ 0.56
NKX2-2O95096 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.56■□□□□ 0.56
NKX2-2O95096 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX2-2O95096 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.56■□□□□ 0.56
NKX2-2O95096 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NKX2-2O95096 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NKX2-2O95096 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NKX2-2O95096 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NKX2-2O95096 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NKX2-2O95096 HLA-G-202ENST00000376815 851 ntBASIC18.55■□□□□ 0.56
NKX2-2O95096 HLA-G-203ENST00000376818 1127 ntBASIC18.55■□□□□ 0.56
NKX2-2O95096 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NKX2-2O95096 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.55■□□□□ 0.56
NKX2-2O95096 AC091874.3-201ENST00000512672 1195 ntBASIC18.55■□□□□ 0.56
NKX2-2O95096 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.55■□□□□ 0.56
NKX2-2O95096 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.55■□□□□ 0.56
NKX2-2O95096 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.55■□□□□ 0.56
NKX2-2O95096 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.55■□□□□ 0.56
NKX2-2O95096 AL109923.1-201ENST00000618799 583 ntBASIC18.55■□□□□ 0.56
NKX2-2O95096 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.55■□□□□ 0.56
NKX2-2O95096 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.55■□□□□ 0.56
NKX2-2O95096 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.55■□□□□ 0.56
NKX2-2O95096 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NKX2-2O95096 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NKX2-2O95096 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NKX2-2O95096 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX2-2O95096 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX2-2O95096 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX2-2O95096 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.54■□□□□ 0.56
NKX2-2O95096 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.54■□□□□ 0.56
NKX2-2O95096 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.54■□□□□ 0.56
NKX2-2O95096 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NKX2-2O95096 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.54■□□□□ 0.56
NKX2-2O95096 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NKX2-2O95096 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.54■□□□□ 0.56
NKX2-2O95096 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.54■□□□□ 0.56
NKX2-2O95096 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.54■□□□□ 0.56
NKX2-2O95096 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NKX2-2O95096 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.54■□□□□ 0.56
NKX2-2O95096 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX2-2O95096 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX2-2O95096 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX2-2O95096 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.54■□□□□ 0.56
NKX2-2O95096 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX2-2O95096 AL691432.2-201ENST00000607222 2038 ntBASIC18.54■□□□□ 0.56
NKX2-2O95096 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NKX2-2O95096 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX2-2O95096 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.54■□□□□ 0.56
NKX2-2O95096 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX2-2O95096 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.53■□□□□ 0.56
NKX2-2O95096 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.53■□□□□ 0.56
NKX2-2O95096 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
NKX2-2O95096 KRT16P6-202ENST00000425692 1426 ntBASIC18.53■□□□□ 0.56
NKX2-2O95096 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NKX2-2O95096 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.53■□□□□ 0.56
NKX2-2O95096 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX2-2O95096 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
NKX2-2O95096 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.53■□□□□ 0.56
NKX2-2O95096 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NKX2-2O95096 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.53■□□□□ 0.56
NKX2-2O95096 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NKX2-2O95096 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.53■□□□□ 0.56
NKX2-2O95096 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX2-2O95096 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-2O95096 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
NKX2-2O95096 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-2O95096 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-2O95096 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-2O95096 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-2O95096 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-2O95096 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-2O95096 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.52■□□□□ 0.56
NKX2-2O95096 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX2-2O95096 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms