Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.9■□□□□ 0.46
TRAF3IP2O43734 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 BX119927.1-201ENST00000636596 1552 ntBASIC17.9■□□□□ 0.46
TRAF3IP2O43734 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF3IP2O43734 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAF3IP2O43734 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 AL109923.1-201ENST00000618799 583 ntBASIC17.89■□□□□ 0.45
TRAF3IP2O43734 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 AC112907.3-201ENST00000577781 2400 ntBASIC17.89■□□□□ 0.45
TRAF3IP2O43734 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAF3IP2O43734 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 DUSP5P2-201ENST00000426873 1033 ntBASIC17.88■□□□□ 0.45
TRAF3IP2O43734 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.88■□□□□ 0.45
TRAF3IP2O43734 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 AC104771.1-201ENST00000603335 964 ntBASIC17.88■□□□□ 0.45
TRAF3IP2O43734 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAF3IP2O43734 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAF3IP2O43734 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAF3IP2O43734 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
TRAF3IP2O43734 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAF3IP2O43734 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAF3IP2O43734 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAF3IP2O43734 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAF3IP2O43734 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.87■□□□□ 0.45
TRAF3IP2O43734 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAF3IP2O43734 AC091874.3-201ENST00000512672 1195 ntBASIC17.87■□□□□ 0.45
TRAF3IP2O43734 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAF3IP2O43734 AL138781.1-201ENST00000566567 1274 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms