Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AC011767.1-201ENST00000617410 1153 ntBASIC18.25■□□□□ 0.51
RNF13O43567 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF13O43567 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF13O43567 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RNF13O43567 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF13O43567 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
RNF13O43567 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF13O43567 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF13O43567 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF13O43567 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF13O43567 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RNF13O43567 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF13O43567 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF13O43567 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF13O43567 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF13O43567 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF13O43567 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RNF13O43567 AC087289.5-201ENST00000586076 3175 ntBASIC18.24■□□□□ 0.51
RNF13O43567 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
RNF13O43567 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RNF13O43567 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF13O43567 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RNF13O43567 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF13O43567 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF13O43567 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF13O43567 PGM5P4-201ENST00000421970 445 ntBASIC18.24■□□□□ 0.51
RNF13O43567 AC006015.1-201ENST00000429970 570 ntBASIC18.24■□□□□ 0.51
RNF13O43567 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF13O43567 BID-214ENST00000617586 542 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF13O43567 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF13O43567 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF13O43567 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF13O43567 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF13O43567 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RNF13O43567 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF13O43567 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF13O43567 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF13O43567 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF13O43567 KRT8P36-201ENST00000489121 1440 ntBASIC18.23■□□□□ 0.51
RNF13O43567 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF13O43567 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF13O43567 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF13O43567 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF13O43567 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF13O43567 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF13O43567 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF13O43567 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF13O43567 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF13O43567 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RNF13O43567 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF13O43567 AL162412.1-201ENST00000567129 965 ntBASIC18.23■□□□□ 0.51
RNF13O43567 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF13O43567 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF13O43567 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF13O43567 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF13O43567 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF13O43567 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF13O43567 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF13O43567 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RNF13O43567 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF13O43567 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF13O43567 SMG8-203ENST00000578922 2178 ntBASIC18.23■□□□□ 0.51
RNF13O43567 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RNF13O43567 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RNF13O43567 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RNF13O43567 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF13O43567 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF13O43567 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.22■□□□□ 0.51
RNF13O43567 AC016405.3-201ENST00000607710 860 ntBASIC18.22■□□□□ 0.51
RNF13O43567 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RNF13O43567 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF13O43567 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF13O43567 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF13O43567 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF13O43567 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF13O43567 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF13O43567 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF13O43567 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF13O43567 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF13O43567 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF13O43567 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RNF13O43567 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF13O43567 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF13O43567 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF13O43567 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF13O43567 DUX4L16-201ENST00000555130 1264 ntBASIC18.21■□□□□ 0.51
RNF13O43567 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms