Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
COCHO43405 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
COCHO43405 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
COCHO43405 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COCHO43405 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COCHO43405 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
COCHO43405 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COCHO43405 KRT8P17-201ENST00000453110 1448 ntBASIC20.82■□□□□ 0.92
COCHO43405 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.82■□□□□ 0.92
COCHO43405 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.82■□□□□ 0.92
COCHO43405 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.82■□□□□ 0.92
COCHO43405 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.82■□□□□ 0.92
COCHO43405 Z99916.2-201ENST00000604037 246 ntBASIC20.82■□□□□ 0.92
COCHO43405 AC110285.5-201ENST00000611501 352 ntBASIC20.82■□□□□ 0.92
COCHO43405 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.82■□□□□ 0.92
COCHO43405 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COCHO43405 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COCHO43405 AL137060.1-201ENST00000618151 2648 ntBASIC20.82■□□□□ 0.92
COCHO43405 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COCHO43405 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COCHO43405 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.81■□□□□ 0.92
COCHO43405 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COCHO43405 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COCHO43405 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
COCHO43405 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COCHO43405 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.81■□□□□ 0.92
COCHO43405 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COCHO43405 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
COCHO43405 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COCHO43405 PRKY-204ENST00000533551 1019 ntBASIC20.81■□□□□ 0.92
COCHO43405 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.81■□□□□ 0.92
COCHO43405 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.81■□□□□ 0.92
COCHO43405 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.81■□□□□ 0.92
COCHO43405 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COCHO43405 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COCHO43405 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
COCHO43405 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.8■□□□□ 0.92
COCHO43405 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COCHO43405 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
COCHO43405 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COCHO43405 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.8■□□□□ 0.92
COCHO43405 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.8■□□□□ 0.92
COCHO43405 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.8■□□□□ 0.92
COCHO43405 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.8■□□□□ 0.92
COCHO43405 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.8■□□□□ 0.92
COCHO43405 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COCHO43405 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.8■□□□□ 0.92
COCHO43405 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COCHO43405 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
COCHO43405 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.79■□□□□ 0.92
COCHO43405 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.79■□□□□ 0.92
COCHO43405 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.79■□□□□ 0.92
COCHO43405 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COCHO43405 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
COCHO43405 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COCHO43405 MIR718-201ENST00000390190 70 ntBASIC20.79■□□□□ 0.92
COCHO43405 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COCHO43405 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.79■□□□□ 0.92
COCHO43405 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.79■□□□□ 0.92
COCHO43405 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.79■□□□□ 0.92
COCHO43405 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COCHO43405 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.79■□□□□ 0.92
COCHO43405 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COCHO43405 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.78■□□□□ 0.92
COCHO43405 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.78■□□□□ 0.92
COCHO43405 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
COCHO43405 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.78■□□□□ 0.92
COCHO43405 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.78■□□□□ 0.92
COCHO43405 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.78■□□□□ 0.92
COCHO43405 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.78■□□□□ 0.92
COCHO43405 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.78■□□□□ 0.92
COCHO43405 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.78■□□□□ 0.92
COCHO43405 AL121906.2-201ENST00000621597 723 ntBASIC20.78■□□□□ 0.92
COCHO43405 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.78■□□□□ 0.92
COCHO43405 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.78■□□□□ 0.92
COCHO43405 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COCHO43405 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.77■□□□□ 0.92
COCHO43405 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COCHO43405 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COCHO43405 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COCHO43405 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COCHO43405 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COCHO43405 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COCHO43405 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
COCHO43405 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COCHO43405 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms