Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
RRP8O43159 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RRP8O43159 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RRP8O43159 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RRP8O43159 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.93■□□□□ 0.62
RRP8O43159 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RRP8O43159 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.93■□□□□ 0.62
RRP8O43159 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RRP8O43159 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RRP8O43159 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.93■□□□□ 0.62
RRP8O43159 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.93■□□□□ 0.62
RRP8O43159 CR392000.1-201ENST00000624770 1228 ntBASIC18.93■□□□□ 0.62
RRP8O43159 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RRP8O43159 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RRP8O43159 AC010542.4-201ENST00000563151 1910 ntBASIC18.93■□□□□ 0.62
RRP8O43159 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RRP8O43159 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RRP8O43159 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RRP8O43159 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RRP8O43159 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RRP8O43159 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RRP8O43159 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RRP8O43159 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RRP8O43159 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RRP8O43159 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RRP8O43159 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RRP8O43159 KSR1P1-201ENST00000446298 240 ntBASIC18.92■□□□□ 0.62
RRP8O43159 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.92■□□□□ 0.62
RRP8O43159 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.92■□□□□ 0.62
RRP8O43159 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RRP8O43159 AC116562.2-201ENST00000507042 360 ntBASIC18.92■□□□□ 0.62
RRP8O43159 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.92■□□□□ 0.62
RRP8O43159 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.92■□□□□ 0.62
RRP8O43159 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.92■□□□□ 0.62
RRP8O43159 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.92■□□□□ 0.62
RRP8O43159 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RRP8O43159 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RRP8O43159 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.92■□□□□ 0.62
RRP8O43159 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RRP8O43159 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RRP8O43159 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
RRP8O43159 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.92■□□□□ 0.62
RRP8O43159 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.91■□□□□ 0.62
RRP8O43159 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RRP8O43159 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RRP8O43159 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RRP8O43159 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RRP8O43159 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.91■□□□□ 0.62
RRP8O43159 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RRP8O43159 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RRP8O43159 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RRP8O43159 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RRP8O43159 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.91■□□□□ 0.62
RRP8O43159 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.91■□□□□ 0.62
RRP8O43159 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RRP8O43159 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RRP8O43159 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
RRP8O43159 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RRP8O43159 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.91■□□□□ 0.62
RRP8O43159 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.91■□□□□ 0.62
RRP8O43159 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.91■□□□□ 0.62
RRP8O43159 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RRP8O43159 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RRP8O43159 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RRP8O43159 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RRP8O43159 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RRP8O43159 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.9■□□□□ 0.62
RRP8O43159 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RRP8O43159 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RRP8O43159 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RRP8O43159 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RRP8O43159 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RRP8O43159 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RRP8O43159 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.9■□□□□ 0.62
RRP8O43159 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RRP8O43159 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.9■□□□□ 0.62
RRP8O43159 C2orf69P3-201ENST00000565542 1120 ntBASIC18.9■□□□□ 0.62
RRP8O43159 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.9■□□□□ 0.62
RRP8O43159 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RRP8O43159 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RRP8O43159 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.9■□□□□ 0.62
RRP8O43159 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RRP8O43159 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RRP8O43159 AC242852.2-201ENST00000615738 1807 ntBASIC18.9■□□□□ 0.62
RRP8O43159 KRT16P1-201ENST00000399124 1418 ntBASIC18.9■□□□□ 0.62
RRP8O43159 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RRP8O43159 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RRP8O43159 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.9■□□□□ 0.62
RRP8O43159 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RRP8O43159 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.89■□□□□ 0.62
RRP8O43159 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RRP8O43159 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RRP8O43159 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RRP8O43159 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RRP8O43159 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RRP8O43159 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.89■□□□□ 0.61
RRP8O43159 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.89■□□□□ 0.61
RRP8O43159 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RRP8O43159 AC023632.3-201ENST00000521633 145 ntBASIC18.89■□□□□ 0.61
RRP8O43159 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms