Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAFD1O14545 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAFD1O14545 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRAFD1O14545 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.57■□□□□ 0.88
TRAFD1O14545 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAFD1O14545 LSM12P1-201ENST00000411836 588 ntBASIC20.57■□□□□ 0.88
TRAFD1O14545 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.57■□□□□ 0.88
TRAFD1O14545 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.57■□□□□ 0.88
TRAFD1O14545 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAFD1O14545 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAFD1O14545 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRAFD1O14545 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
TRAFD1O14545 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAFD1O14545 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAFD1O14545 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAFD1O14545 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAFD1O14545 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRAFD1O14545 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAFD1O14545 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAFD1O14545 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAFD1O14545 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAFD1O14545 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAFD1O14545 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAFD1O14545 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAFD1O14545 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAFD1O14545 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
TRAFD1O14545 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRAFD1O14545 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAFD1O14545 AL356652.1-201ENST00000615962 565 ntBASIC20.56■□□□□ 0.88
TRAFD1O14545 MYC-209ENST00000641252 345 ntBASIC20.56■□□□□ 0.88
TRAFD1O14545 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAFD1O14545 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAFD1O14545 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAFD1O14545 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAFD1O14545 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAFD1O14545 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAFD1O14545 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAFD1O14545 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAFD1O14545 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRAFD1O14545 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAFD1O14545 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAFD1O14545 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAFD1O14545 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAFD1O14545 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAFD1O14545 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRAFD1O14545 PGM5P4-201ENST00000421970 445 ntBASIC20.55■□□□□ 0.88
TRAFD1O14545 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
TRAFD1O14545 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.55■□□□□ 0.88
TRAFD1O14545 AC091874.3-201ENST00000512672 1195 ntBASIC20.55■□□□□ 0.88
TRAFD1O14545 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAFD1O14545 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAFD1O14545 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAFD1O14545 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRAFD1O14545 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAFD1O14545 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAFD1O14545 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRAFD1O14545 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.55■□□□□ 0.88
TRAFD1O14545 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRAFD1O14545 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAFD1O14545 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAFD1O14545 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAFD1O14545 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAFD1O14545 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAFD1O14545 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAFD1O14545 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAFD1O14545 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAFD1O14545 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAFD1O14545 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAFD1O14545 DUSP5P2-201ENST00000426873 1033 ntBASIC20.54■□□□□ 0.88
TRAFD1O14545 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.54■□□□□ 0.88
TRAFD1O14545 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.54■□□□□ 0.88
TRAFD1O14545 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.54■□□□□ 0.88
TRAFD1O14545 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAFD1O14545 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
TRAFD1O14545 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAFD1O14545 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAFD1O14545 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAFD1O14545 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAFD1O14545 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.53■□□□□ 0.88
TRAFD1O14545 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAFD1O14545 KRT8P36-201ENST00000489121 1440 ntBASIC20.53■□□□□ 0.88
TRAFD1O14545 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAFD1O14545 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAFD1O14545 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAFD1O14545 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAFD1O14545 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAFD1O14545 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAFD1O14545 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAFD1O14545 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRAFD1O14545 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAFD1O14545 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAFD1O14545 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.53■□□□□ 0.88
TRAFD1O14545 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.53■□□□□ 0.88
TRAFD1O14545 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAFD1O14545 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.53■□□□□ 0.88
TRAFD1O14545 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAFD1O14545 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAFD1O14545 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAFD1O14545 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
TRAFD1O14545 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms