Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN4O14493 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN4O14493 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CLDN4O14493 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CLDN4O14493 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.9■□□□□ 0.62
CLDN4O14493 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN4O14493 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN4O14493 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN4O14493 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 PNMA6B-201ENST00000538162 1200 ntBASIC18.9■□□□□ 0.62
CLDN4O14493 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN4O14493 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN4O14493 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.9■□□□□ 0.62
CLDN4O14493 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN4O14493 GABARAPL3-202ENST00000624044 1851 ntBASIC18.9■□□□□ 0.62
CLDN4O14493 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN4O14493 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN4O14493 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.89■□□□□ 0.62
CLDN4O14493 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN4O14493 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN4O14493 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN4O14493 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN4O14493 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN4O14493 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN4O14493 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN4O14493 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN4O14493 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.89■□□□□ 0.61
CLDN4O14493 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.89■□□□□ 0.61
CLDN4O14493 AC005829.2-201ENST00000571422 1056 ntBASIC18.89■□□□□ 0.61
CLDN4O14493 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN4O14493 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN4O14493 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN4O14493 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN4O14493 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN4O14493 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN4O14493 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN4O14493 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN4O14493 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN4O14493 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN4O14493 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
CLDN4O14493 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
CLDN4O14493 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDN4O14493 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN4O14493 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN4O14493 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN4O14493 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN4O14493 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN4O14493 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN4O14493 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDN4O14493 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.88■□□□□ 0.61
CLDN4O14493 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.88■□□□□ 0.61
CLDN4O14493 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.88■□□□□ 0.61
CLDN4O14493 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.88■□□□□ 0.61
CLDN4O14493 AL031963.3-201ENST00000606441 850 ntBASIC18.88■□□□□ 0.61
CLDN4O14493 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDN4O14493 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN4O14493 KRT8P17-201ENST00000453110 1448 ntBASIC18.88■□□□□ 0.61
CLDN4O14493 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN4O14493 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDN4O14493 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN4O14493 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN4O14493 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN4O14493 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN4O14493 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN4O14493 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN4O14493 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN4O14493 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN4O14493 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CLDN4O14493 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN4O14493 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN4O14493 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN4O14493 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN4O14493 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN4O14493 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLDN4O14493 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN4O14493 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN4O14493 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN4O14493 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN4O14493 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN4O14493 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CLDN4O14493 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN4O14493 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN4O14493 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CLDN4O14493 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN4O14493 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN4O14493 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms