Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AP3B1O00203 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.29■□□□□ 0.84
AP3B1O00203 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP3B1O00203 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AP3B1O00203 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP3B1O00203 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
AP3B1O00203 KRT8P17-201ENST00000453110 1448 ntBASIC20.28■□□□□ 0.84
AP3B1O00203 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.28■□□□□ 0.84
AP3B1O00203 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.28■□□□□ 0.84
AP3B1O00203 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP3B1O00203 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.28■□□□□ 0.84
AP3B1O00203 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP3B1O00203 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.28■□□□□ 0.84
AP3B1O00203 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.28■□□□□ 0.84
AP3B1O00203 AL512625.2-201ENST00000417533 625 ntBASIC20.28■□□□□ 0.84
AP3B1O00203 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AP3B1O00203 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP3B1O00203 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.28■□□□□ 0.84
AP3B1O00203 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.28■□□□□ 0.84
AP3B1O00203 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.28■□□□□ 0.84
AP3B1O00203 AL589743.5-201ENST00000616611 1050 ntBASIC20.28■□□□□ 0.84
AP3B1O00203 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP3B1O00203 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.28■□□□□ 0.84
AP3B1O00203 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP3B1O00203 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP3B1O00203 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP3B1O00203 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
AP3B1O00203 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
AP3B1O00203 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.27■□□□□ 0.84
AP3B1O00203 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP3B1O00203 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP3B1O00203 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP3B1O00203 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.27■□□□□ 0.84
AP3B1O00203 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.27■□□□□ 0.84
AP3B1O00203 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP3B1O00203 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.27■□□□□ 0.84
AP3B1O00203 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.27■□□□□ 0.84
AP3B1O00203 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
AP3B1O00203 AL031963.3-201ENST00000606441 850 ntBASIC20.27■□□□□ 0.84
AP3B1O00203 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.27■□□□□ 0.84
AP3B1O00203 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP3B1O00203 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP3B1O00203 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP3B1O00203 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.27■□□□□ 0.84
AP3B1O00203 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP3B1O00203 KRT8P20-201ENST00000423953 1409 ntBASIC20.27■□□□□ 0.83
AP3B1O00203 KRT16P6-202ENST00000425692 1426 ntBASIC20.27■□□□□ 0.83
AP3B1O00203 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
AP3B1O00203 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.26■□□□□ 0.83
AP3B1O00203 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
AP3B1O00203 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
AP3B1O00203 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.26■□□□□ 0.83
AP3B1O00203 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP3B1O00203 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.26■□□□□ 0.83
AP3B1O00203 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
AP3B1O00203 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP3B1O00203 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP3B1O00203 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP3B1O00203 HLA-G-202ENST00000376815 851 ntBASIC20.26■□□□□ 0.83
AP3B1O00203 HLA-G-203ENST00000376818 1127 ntBASIC20.26■□□□□ 0.83
AP3B1O00203 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.26■□□□□ 0.83
AP3B1O00203 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.26■□□□□ 0.83
AP3B1O00203 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.26■□□□□ 0.83
AP3B1O00203 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP3B1O00203 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP3B1O00203 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AP3B1O00203 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AP3B1O00203 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP3B1O00203 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AP3B1O00203 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP3B1O00203 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
AP3B1O00203 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP3B1O00203 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
AP3B1O00203 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.25■□□□□ 0.83
AP3B1O00203 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
AP3B1O00203 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.25■□□□□ 0.83
AP3B1O00203 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.25■□□□□ 0.83
AP3B1O00203 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
AP3B1O00203 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP3B1O00203 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
AP3B1O00203 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP3B1O00203 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.25■□□□□ 0.83
AP3B1O00203 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
AP3B1O00203 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP3B1O00203 PTBP1P-201ENST00000554374 1601 ntBASIC20.24■□□□□ 0.83
AP3B1O00203 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP3B1O00203 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP3B1O00203 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.24■□□□□ 0.83
AP3B1O00203 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
AP3B1O00203 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP3B1O00203 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.24■□□□□ 0.83
AP3B1O00203 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP3B1O00203 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP3B1O00203 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.24■□□□□ 0.83
AP3B1O00203 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP3B1O00203 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.24■□□□□ 0.83
AP3B1O00203 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.24■□□□□ 0.83
AP3B1O00203 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP3B1O00203 AL691432.2-201ENST00000607222 2038 ntBASIC20.24■□□□□ 0.83
AP3B1O00203 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms