Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 C2orf69P4-201ENST00000565394 541 ntBASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 MIR4497-201ENST00000583208 89 ntBASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 AL020996.1-203ENST00000536896 2307 ntBASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMX2-CTNND1H3BSU7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 Z98882.1-201ENST00000622160 2253 ntBASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TMX2-CTNND1H3BSU7 AC026471.6-201ENST00000622954 1905 ntBASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.66■□□□□ 0.74
TMX2-CTNND1H3BSU7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMX2-CTNND1H3BSU7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMX2-CTNND1H3BSU7 AFG3L1P-217ENST00000557444 2447 ntBASIC19.65■□□□□ 0.74
TMX2-CTNND1H3BSU7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.65■□□□□ 0.74
TMX2-CTNND1H3BSU7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMX2-CTNND1H3BSU7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMX2-CTNND1H3BSU7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMX2-CTNND1H3BSU7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMX2-CTNND1H3BSU7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.65■□□□□ 0.74
TMX2-CTNND1H3BSU7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMX2-CTNND1H3BSU7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TMX2-CTNND1H3BSU7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.65■□□□□ 0.74
TMX2-CTNND1H3BSU7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.65■□□□□ 0.74
TMX2-CTNND1H3BSU7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms