Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.98■□□□□ 0.63
C1QTNF9BB2RNN3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.98■□□□□ 0.63
C1QTNF9BB2RNN3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
C1QTNF9BB2RNN3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF9BB2RNN3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.98■□□□□ 0.63
C1QTNF9BB2RNN3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF9BB2RNN3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.98■□□□□ 0.63
C1QTNF9BB2RNN3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF9BB2RNN3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 AL031985.4-201ENST00000642138 673 ntBASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 AC005332.1-201ENST00000577698 1310 ntBASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.97■□□□□ 0.63
C1QTNF9BB2RNN3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 COX11P1-201ENST00000489116 835 ntBASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 AC087742.1-201ENST00000575880 1738 ntBASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF9BB2RNN3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 AC116407.4-201ENST00000623319 1061 ntBASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF9BB2RNN3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 AC097488.1-201ENST00000507834 756 ntBASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
C1QTNF9BB2RNN3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms