Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 UNC93B4-201ENST00000505679 747 ntBASIC15.85■□□□□ 0.13
LINC01548A6NM66 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC01548A6NM66 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01548A6NM66 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC01548A6NM66 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
LINC01548A6NM66 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LINC01548A6NM66 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC01548A6NM66 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC01548A6NM66 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LINC01548A6NM66 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 POU5F1P3-201ENST00000428824 1078 ntBASIC15.84■□□□□ 0.13
LINC01548A6NM66 FAM201B-201ENST00000458407 597 ntBASIC15.84■□□□□ 0.13
LINC01548A6NM66 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
LINC01548A6NM66 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC01548A6NM66 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LINC01548A6NM66 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC01548A6NM66 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LINC01548A6NM66 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC01548A6NM66 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LINC01548A6NM66 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
LINC01548A6NM66 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.83■□□□□ 0.13
LINC01548A6NM66 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LINC01548A6NM66 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.83■□□□□ 0.13
LINC01548A6NM66 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
LINC01548A6NM66 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01548A6NM66 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01548A6NM66 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01548A6NM66 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.83■□□□□ 0.12
LINC01548A6NM66 AC026366.1-201ENST00000488803 879 ntBASIC15.83■□□□□ 0.12
LINC01548A6NM66 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01548A6NM66 AP003097.1-201ENST00000530657 1135 ntBASIC15.83■□□□□ 0.12
LINC01548A6NM66 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.83■□□□□ 0.12
LINC01548A6NM66 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.83■□□□□ 0.12
LINC01548A6NM66 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.83■□□□□ 0.12
LINC01548A6NM66 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01548A6NM66 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.83■□□□□ 0.12
LINC01548A6NM66 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.83■□□□□ 0.12
LINC01548A6NM66 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01548A6NM66 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.83■□□□□ 0.12
LINC01548A6NM66 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC01548A6NM66 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
LINC01548A6NM66 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01548A6NM66 GABARAPL3-202ENST00000624044 1851 ntBASIC15.82■□□□□ 0.12
LINC01548A6NM66 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LINC01548A6NM66 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01548A6NM66 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.82■□□□□ 0.12
LINC01548A6NM66 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01548A6NM66 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LINC01548A6NM66 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01548A6NM66 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.82■□□□□ 0.12
LINC01548A6NM66 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.82■□□□□ 0.12
LINC01548A6NM66 AL390719.1-204ENST00000412397 1219 ntBASIC15.82■□□□□ 0.12
LINC01548A6NM66 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC01548A6NM66 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
LINC01548A6NM66 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms