Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MEIS3P1A6NDR6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 DPP3P2-201ENST00000416030 1696 ntBASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 RARRES2P11-201ENST00000635158 484 ntBASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 HCG11-201ENST00000411553 5696 ntBASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MEIS3P1A6NDR6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 AL356441.2-201ENST00000443009 864 ntBASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 TSPY26P-201ENST00000476365 1326 ntBASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 NEFHP1-201ENST00000412845 2629 ntBASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MEIS3P1A6NDR6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MEIS3P1A6NDR6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms