Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.32■□□□□ 0.68
CNOT1A5YKK6 AL691432.3-201ENST00000621860 400 ntBASIC19.32■□□□□ 0.68
CNOT1A5YKK6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 AC069148.1-201ENST00000608741 768 ntBASIC19.31■□□□□ 0.68
CNOT1A5YKK6 AC130371.2-201ENST00000619443 611 ntBASIC19.31■□□□□ 0.68
CNOT1A5YKK6 AC005332.1-201ENST00000577698 1310 ntBASIC19.31■□□□□ 0.68
CNOT1A5YKK6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 FSCN1P1-201ENST00000568912 1481 ntBASIC19.31■□□□□ 0.68
CNOT1A5YKK6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNOT1A5YKK6 AP000593.1-201ENST00000393668 712 ntBASIC19.3■□□□□ 0.68
CNOT1A5YKK6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.3■□□□□ 0.68
CNOT1A5YKK6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 B3GAT3P1-201ENST00000471720 806 ntBASIC19.3■□□□□ 0.68
CNOT1A5YKK6 AC091390.4-202ENST00000476426 537 ntBASIC19.3■□□□□ 0.68
CNOT1A5YKK6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNOT1A5YKK6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 FAM86EP-206ENST00000510506 987 ntBASIC19.29■□□□□ 0.68
CNOT1A5YKK6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 DGCR10-201ENST00000609839 495 ntBASIC19.29■□□□□ 0.68
CNOT1A5YKK6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.29■□□□□ 0.68
CNOT1A5YKK6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 FDX1P1-201ENST00000449115 551 ntBASIC19.28■□□□□ 0.68
CNOT1A5YKK6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 AC006538.3-201ENST00000612495 578 ntBASIC19.28■□□□□ 0.68
CNOT1A5YKK6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.28■□□□□ 0.68
CNOT1A5YKK6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.27■□□□□ 0.68
CNOT1A5YKK6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT1A5YKK6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CNOT1A5YKK6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.27■□□□□ 0.68
CNOT1A5YKK6 AC093458.2-201ENST00000623150 629 ntBASIC19.27■□□□□ 0.68
CNOT1A5YKK6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CNOT1A5YKK6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.27■□□□□ 0.68
CNOT1A5YKK6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNOT1A5YKK6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms