Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 AL356652.1-201ENST00000615962 565 ntBASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LINC00959A0A1B0GUT2 AC125437.2-201ENST00000625180 2167 ntBASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 MYCNOS-205ENST00000641950 531 ntBASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00959A0A1B0GUT2 AL158211.5-201ENST00000623583 2518 ntBASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 AC087633.2-202ENST00000565166 1439 ntBASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 AL591742.1-201ENST00000604433 565 ntBASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00959A0A1B0GUT2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms