Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 AC233280.20-201ENST00000637412 416 ntBASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 CASC19-208ENST00000641056 1292 ntBASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 CASC19-227ENST00000641411 1285 ntBASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
C9orf40Q8IXQ3 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 RN7SKP36-201ENST00000363997 312 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 SNORD46-201ENST00000364043 104 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AL590240.2-201ENST00000413370 894 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 RPL6P24-201ENST00000445338 864 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 RPL7L1P11-201ENST00000446092 721 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 RHEBP1-201ENST00000448647 556 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 PCMTD1P3-201ENST00000451824 472 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AC097460.2-201ENST00000511857 741 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 GCSHP1-201ENST00000512554 484 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AC138749.2-201ENST00000566048 167 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 MIR4685-201ENST00000578185 69 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 RN7SL835P-201ENST00000579920 262 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AC025162.2-201ENST00000619602 560 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AC241377.2-202ENST00000636462 997 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AP000842.4-201ENST00000638781 748 ntBASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
C9orf40Q8IXQ3 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AC009948.5-201ENST00000624360 4406 ntBASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 SNORA73B-201ENST00000363217 204 ntBASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AL355375.1-201ENST00000405686 392 ntBASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 SNX18P13-201ENST00000412442 529 ntBASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AL355862.1-201ENST00000412705 353 ntBASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 ST13P2-201ENST00000438916 1109 ntBASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms