Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 EGLN3P1-201ENST00000541727 720 ntBASIC8.08□□□□□ -1.12
UBE3AQ05086 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC8.08□□□□□ -1.12
UBE3AQ05086 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC8.08□□□□□ -1.12
UBE3AQ05086 AL137802.2-201ENST00000562878 1110 ntBASIC8.08□□□□□ -1.12
UBE3AQ05086 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC8.08□□□□□ -1.12
UBE3AQ05086 AP001542.1-201ENST00000591314 200 ntBASIC8.08□□□□□ -1.12
UBE3AQ05086 AC069499.2-201ENST00000610665 382 ntBASIC8.08□□□□□ -1.12
UBE3AQ05086 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC8.08□□□□□ -1.12
UBE3AQ05086 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC8.08□□□□□ -1.12
UBE3AQ05086 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
UBE3AQ05086 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
UBE3AQ05086 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
UBE3AQ05086 EEF1A1P28-201ENST00000450915 1403 ntBASIC8.08□□□□□ -1.12
UBE3AQ05086 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
UBE3AQ05086 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
UBE3AQ05086 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
UBE3AQ05086 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
UBE3AQ05086 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC8.08□□□□□ -1.12
UBE3AQ05086 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 KCNMB2-207ENST00000452583 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
UBE3AQ05086 AC020978.8-201ENST00000571975 3022 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC8.07□□□□□ -1.12
UBE3AQ05086 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
UBE3AQ05086 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC8.07□□□□□ -1.12
UBE3AQ05086 SSX6-201ENST00000376932 562 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
UBE3AQ05086 GAS8-AS1-201ENST00000408886 435 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC8.07□□□□□ -1.12
UBE3AQ05086 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC8.07□□□□□ -1.12
UBE3AQ05086 CEACAMP11-201ENST00000455211 583 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 SCDP1-201ENST00000455244 1081 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 RPSAP24-201ENST00000461543 873 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 TDGF1P6-201ENST00000463873 448 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC8.07□□□□□ -1.12
UBE3AQ05086 FAM177A1P1-201ENST00000503598 473 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC8.07□□□□□ -1.12
UBE3AQ05086 MRPS5P3-201ENST00000515577 166 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC8.07□□□□□ -1.12
UBE3AQ05086 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
UBE3AQ05086 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC8.07□□□□□ -1.12
UBE3AQ05086 AC005518.2-201ENST00000603254 282 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 U91328.4-201ENST00000608919 517 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC8.07□□□□□ -1.12
UBE3AQ05086 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC8.07□□□□□ -1.12
UBE3AQ05086 uc_338.37-201ENST00000620113 186 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 RN7SL680P-201ENST00000620379 299 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 AL138693.1-201ENST00000622219 129 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 AC129908.1-201ENST00000624553 648 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC8.07□□□□□ -1.12
UBE3AQ05086 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
UBE3AQ05086 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.07□□□□□ -1.12
UBE3AQ05086 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
UBE3AQ05086 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC8.07□□□□□ -1.12
UBE3AQ05086 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC8.07□□□□□ -1.12
UBE3AQ05086 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
UBE3AQ05086 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
UBE3AQ05086 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UBE3AQ05086 MAPK10-279ENST00000641157 2449 ntBASIC8.07□□□□□ -1.12
UBE3AQ05086 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.07□□□□□ -1.12
UBE3AQ05086 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
UBE3AQ05086 OR51E1-202ENST00000530215 2942 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.06□□□□□ -1.12
UBE3AQ05086 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
UBE3AQ05086 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
UBE3AQ05086 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 RN7SKP184-201ENST00000362348 333 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 RNA5SP429-201ENST00000363688 109 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 MIR555-201ENST00000384987 96 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC8.06□□□□□ -1.12
UBE3AQ05086 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC8.06□□□□□ -1.12
UBE3AQ05086 AC027124.1-201ENST00000440852 466 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC8.06□□□□□ -1.12
UBE3AQ05086 AL451074.4-201ENST00000447545 470 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 AL031736.1-201ENST00000449688 618 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 RN7SL152P-201ENST00000484176 298 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 EIF4E2P2-201ENST00000492033 736 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 TECRP2-201ENST00000503270 928 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 AC090835.1-201ENST00000515189 1024 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms