Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CARD8-214ENST00000520007 614 ntTSL 2 BASIC8.83□□□□□ -1
HLA-DOAP06340 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HLA-DOAP06340 IGKV2-29-201ENST00000521304 372 ntBASIC8.83□□□□□ -1
HLA-DOAP06340 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC8.83□□□□□ -1
HLA-DOAP06340 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC8.83□□□□□ -1
HLA-DOAP06340 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC8.83□□□□□ -1
HLA-DOAP06340 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC8.83□□□□□ -1
HLA-DOAP06340 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC8.83□□□□□ -1
HLA-DOAP06340 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
HLA-DOAP06340 AL078624.2-201ENST00000605063 554 ntBASIC8.83□□□□□ -1
HLA-DOAP06340 Z93930.3-201ENST00000607919 749 ntBASIC8.83□□□□□ -1
HLA-DOAP06340 TEX41-279ENST00000629149 609 ntTSL 5 BASIC8.83□□□□□ -1
HLA-DOAP06340 AC243725.1-201ENST00000637164 436 ntBASIC8.83□□□□□ -1
HLA-DOAP06340 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
HLA-DOAP06340 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
HLA-DOAP06340 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.83□□□□□ -1
HLA-DOAP06340 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HLA-DOAP06340 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
HLA-DOAP06340 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HLA-DOAP06340 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC8.83□□□□□ -1
HLA-DOAP06340 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.83□□□□□ -1
HLA-DOAP06340 AC126773.4-201ENST00000612545 3043 ntBASIC8.83□□□□□ -1
HLA-DOAP06340 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
HLA-DOAP06340 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC8.83□□□□□ -1
HLA-DOAP06340 AL121936.1-201ENST00000641660 2884 ntBASIC8.83□□□□□ -1
HLA-DOAP06340 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.82□□□□□ -1
HLA-DOAP06340 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.82□□□□□ -1
HLA-DOAP06340 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC8.82□□□□□ -1
HLA-DOAP06340 AL136298.2-201ENST00000556497 1570 ntBASIC8.82□□□□□ -1
HLA-DOAP06340 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC8.82□□□□□ -1
HLA-DOAP06340 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
HLA-DOAP06340 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC8.82□□□□□ -1
HLA-DOAP06340 FSHR-201ENST00000304421 2176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
HLA-DOAP06340 AC125232.1-201ENST00000452554 1408 ntBASIC8.82□□□□□ -1
HLA-DOAP06340 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.82□□□□□ -1
HLA-DOAP06340 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HLA-DOAP06340 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HLA-DOAP06340 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HLA-DOAP06340 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC8.82□□□□□ -1
HLA-DOAP06340 SOD1P1-201ENST00000407803 440 ntBASIC8.82□□□□□ -1
HLA-DOAP06340 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HLA-DOAP06340 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.82□□□□□ -1
HLA-DOAP06340 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC8.82□□□□□ -1
HLA-DOAP06340 FUNDC2P2-202ENST00000443452 493 ntBASIC8.82□□□□□ -1
HLA-DOAP06340 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC8.82□□□□□ -1
HLA-DOAP06340 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC8.82□□□□□ -1
HLA-DOAP06340 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC8.82□□□□□ -1
HLA-DOAP06340 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
HLA-DOAP06340 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.82□□□□□ -1
HLA-DOAP06340 FAM30C-201ENST00000561158 410 ntBASIC8.82□□□□□ -1
HLA-DOAP06340 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC8.82□□□□□ -1
HLA-DOAP06340 AP001554.1-201ENST00000604533 376 ntBASIC8.82□□□□□ -1
HLA-DOAP06340 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
HLA-DOAP06340 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC8.82□□□□□ -1
HLA-DOAP06340 AC233280.20-201ENST00000637412 416 ntBASIC8.82□□□□□ -1
HLA-DOAP06340 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC8.82□□□□□ -1
HLA-DOAP06340 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC8.82□□□□□ -1
HLA-DOAP06340 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC8.82□□□□□ -1
HLA-DOAP06340 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.82□□□□□ -1
HLA-DOAP06340 MFSD8-218ENST00000641186 4448 ntBASIC8.82□□□□□ -1
HLA-DOAP06340 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8.81□□□□□ -1
HLA-DOAP06340 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HLA-DOAP06340 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC8.81□□□□□ -1
HLA-DOAP06340 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HLA-DOAP06340 HDAC1P1-201ENST00000455482 1445 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC8.81□□□□□ -1
HLA-DOAP06340 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
HLA-DOAP06340 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
HLA-DOAP06340 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
HLA-DOAP06340 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.81□□□□□ -1
HLA-DOAP06340 AL359547.1-201ENST00000419168 2190 ntTSL 1 (best) BASIC8.81□□□□□ -1
HLA-DOAP06340 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HLA-DOAP06340 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC8.81□□□□□ -1
HLA-DOAP06340 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC8.81□□□□□ -1
HLA-DOAP06340 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC8.81□□□□□ -1
HLA-DOAP06340 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC8.81□□□□□ -1
HLA-DOAP06340 SNORA11D-201ENST00000408548 128 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 SNORA11E-201ENST00000408778 128 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 RNA5SP177-201ENST00000410122 107 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 AC009413.1-201ENST00000414823 399 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC8.81□□□□□ -1
HLA-DOAP06340 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC8.81□□□□□ -1
HLA-DOAP06340 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC8.81□□□□□ -1
HLA-DOAP06340 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC8.81□□□□□ -1
HLA-DOAP06340 RPS7P4-201ENST00000444127 582 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC8.81□□□□□ -1
HLA-DOAP06340 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC8.81□□□□□ -1
HLA-DOAP06340 AF305872.1-201ENST00000485217 471 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 AC009153.1-201ENST00000485799 496 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 CHCHD2P7-201ENST00000508008 452 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 RPS23-208ENST00000512493 443 ntTSL 3 BASIC8.81□□□□□ -1
HLA-DOAP06340 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC8.81□□□□□ -1
HLA-DOAP06340 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC8.81□□□□□ -1
HLA-DOAP06340 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.81□□□□□ -1
HLA-DOAP06340 MIR3908-201ENST00000579798 126 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC8.81□□□□□ -1
HLA-DOAP06340 AC137695.1-201ENST00000604126 489 ntBASIC8.81□□□□□ -1
HLA-DOAP06340 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC8.81□□□□□ -1
HLA-DOAP06340 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC8.81□□□□□ -1
HLA-DOAP06340 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms