Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TSPAN18-201ENST00000340160 4229 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 ORC1-202ENST00000371568 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 DMP1-201ENST00000282479 2634 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 AC079062.1-202ENST00000581011 2636 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 TCF4-208ENST00000543082 2399 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 CNTNAP4-201ENST00000307431 4867 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 CNTNAP4-207ENST00000611870 4867 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 SSBP2-205ENST00000505980 1521 ntTSL 2 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 NFKB1-212ENST00000600343 4010 ntTSL 2 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 RCAN1-210ENST00000487990 2520 ntTSL 2 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 ZNF830-201ENST00000361952 2246 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 NCF2-202ENST00000367536 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 RNU5B-1-201ENST00000363286 116 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 BEND6-201ENST00000370745 579 ntTSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 FGF7P8-201ENST00000402994 292 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 OSTCP6-201ENST00000407493 457 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 AL023773.2-201ENST00000412173 1005 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 MTCO1P43-201ENST00000431831 488 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 RPSAP53-201ENST00000433498 862 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 AL354941.1-201ENST00000438600 464 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 AC064862.2-201ENST00000445460 196 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 RN7SL461P-201ENST00000484915 282 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 PDPN-205ENST00000487038 607 ntTSL 2 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 AHI1-208ENST00000488690 712 ntTSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 PPBPP2-202ENST00000514391 346 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 AC092709.1-201ENST00000521355 1045 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 NDUFS5P6-201ENST00000529136 295 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 AC068790.1-201ENST00000536166 355 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 AL121839.1-201ENST00000556233 1185 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 AC007346.1-201ENST00000569208 867 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 AC022662.1-201ENST00000580252 331 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 AC087645.1-201ENST00000588528 291 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 MIMT1-201ENST00000597105 1050 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 EAF1-AS1-212ENST00000626521 561 ntTSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 NLRP1-215ENST00000613500 4494 ntTSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 SLC24A1-201ENST00000261892 5768 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 TAF1L-201ENST00000242310 6216 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 SMC1B-202ENST00000404354 3636 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 BARD1-213ENST00000619009 3967 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 MYH13-202ENST00000418404 6067 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 C1QTNF3-AMACR-201ENST00000382079 3424 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 AL445531.1-201ENST00000562653 1728 ntBASIC9.73□□□□□ -0.85
LRCH3Q96II8 ZNF585A-203ENST00000392157 3190 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 DAPP1-203ENST00000512369 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 AC024610.2-204ENST00000637478 2867 ntTSL 5 BASIC9.73□□□□□ -0.85
LRCH3Q96II8 EXD2-203ENST00000409018 3252 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRCH3Q96II8 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
LRCH3Q96II8 MDH1B-201ENST00000374412 2553 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
LRCH3Q96II8 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
LRCH3Q96II8 KDELC1P1-201ENST00000512118 1509 ntBASIC9.72□□□□□ -0.85
LRCH3Q96II8 CDH23-213ENST00000619887 4224 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LRCH3Q96II8 NPHP1-202ENST00000355301 1932 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LRCH3Q96II8 DNAH7-203ENST00000410072 1937 ntTSL 2 BASIC9.72□□□□□ -0.85
LRCH3Q96II8 C7orf71-201ENST00000409974 1956 ntTSL 2 BASIC9.72□□□□□ -0.85
LRCH3Q96II8 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
LRCH3Q96II8 FRG2C-201ENST00000308062 2078 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
LRCH3Q96II8 FLJ22447-201ENST00000229465 1655 ntTSL 2 BASIC9.72□□□□□ -0.85
LRCH3Q96II8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LRCH3Q96II8 SNORD116.1-201ENST00000365628 92 ntBASIC9.72□□□□□ -0.85
LRCH3Q96II8 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
LRCH3Q96II8 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LRCH3Q96II8 VTA1P1-201ENST00000414044 866 ntBASIC9.72□□□□□ -0.85
LRCH3Q96II8 AL445183.3-201ENST00000414168 502 ntBASIC9.72□□□□□ -0.85
LRCH3Q96II8 TCEA1P4-201ENST00000415066 844 ntBASIC9.72□□□□□ -0.85
LRCH3Q96II8 AC018866.1-202ENST00000421820 470 ntTSL 2 BASIC9.72□□□□□ -0.85
LRCH3Q96II8 CYP4F26P-202ENST00000433357 852 ntTSL 5 BASIC9.72□□□□□ -0.85
LRCH3Q96II8 FABP5P10-201ENST00000435729 408 ntBASIC9.72□□□□□ -0.85
LRCH3Q96II8 ARAFP2-201ENST00000440565 559 ntBASIC9.72□□□□□ -0.85
LRCH3Q96II8 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC9.72□□□□□ -0.85
LRCH3Q96II8 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC9.72□□□□□ -0.85
LRCH3Q96II8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC9.72□□□□□ -0.85
LRCH3Q96II8 AP002345.1-201ENST00000456493 928 ntBASIC9.72□□□□□ -0.85
LRCH3Q96II8 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC9.72□□□□□ -0.85
LRCH3Q96II8 PSMA6P2-201ENST00000457574 686 ntBASIC9.72□□□□□ -0.85
LRCH3Q96II8 AL391825.1-202ENST00000458136 741 ntBASIC9.72□□□□□ -0.85
LRCH3Q96II8 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms