Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC8.12□□□□□ -1.11
UBE3AQ05086 WASF5P-205ENST00000428639 1455 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 AC117382.2-201ENST00000564748 3151 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 RN7SKP23-201ENST00000625159 4301 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
UBE3AQ05086 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC8.12□□□□□ -1.11
UBE3AQ05086 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE3AQ05086 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE3AQ05086 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
UBE3AQ05086 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
UBE3AQ05086 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC8.11□□□□□ -1.11
UBE3AQ05086 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE3AQ05086 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC8.11□□□□□ -1.11
UBE3AQ05086 AC105046.1-201ENST00000566457 4997 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 AC020895.2-201ENST00000624996 1839 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.11□□□□□ -1.11
UBE3AQ05086 U3.31-201ENST00000408113 216 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC8.11□□□□□ -1.11
UBE3AQ05086 RPL5P28-201ENST00000418634 693 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 TRGV5P-201ENST00000419915 354 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 AC140479.1-201ENST00000440423 337 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC8.11□□□□□ -1.11
UBE3AQ05086 RN7SL688P-201ENST00000471754 275 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 HNRNPA1P44-201ENST00000503999 879 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
UBE3AQ05086 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC8.11□□□□□ -1.11
UBE3AQ05086 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC8.11□□□□□ -1.11
UBE3AQ05086 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC8.11□□□□□ -1.11
UBE3AQ05086 AC126323.4-201ENST00000566935 234 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 AC061975.3-201ENST00000583209 244 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 COX6CP16-201ENST00000603667 216 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 AC026367.2-201ENST00000610630 553 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 AL161931.1-201ENST00000612768 246 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 AL451054.1-201ENST00000621770 772 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
UBE3AQ05086 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE3AQ05086 OR5M2P-202ENST00000641241 4242 ntBASIC8.11□□□□□ -1.11
UBE3AQ05086 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
UBE3AQ05086 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE3AQ05086 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
UBE3AQ05086 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
UBE3AQ05086 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC8.11□□□□□ -1.11
UBE3AQ05086 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
UBE3AQ05086 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE3AQ05086 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC8.11□□□□□ -1.11
UBE3AQ05086 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
UBE3AQ05086 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
UBE3AQ05086 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE3AQ05086 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
UBE3AQ05086 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
UBE3AQ05086 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
UBE3AQ05086 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.1□□□□□ -1.11
UBE3AQ05086 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
UBE3AQ05086 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
UBE3AQ05086 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
UBE3AQ05086 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
UBE3AQ05086 AC016251.1-201ENST00000624299 4198 ntBASIC8.1□□□□□ -1.11
UBE3AQ05086 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE3AQ05086 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
UBE3AQ05086 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
UBE3AQ05086 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.1□□□□□ -1.11
UBE3AQ05086 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
UBE3AQ05086 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
UBE3AQ05086 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
UBE3AQ05086 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
UBE3AQ05086 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
UBE3AQ05086 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
UBE3AQ05086 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC8.1□□□□□ -1.11
UBE3AQ05086 SNORA2C-201ENST00000408564 137 ntBASIC8.1□□□□□ -1.11
UBE3AQ05086 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE3AQ05086 AL121578.1-201ENST00000428051 892 ntBASIC8.1□□□□□ -1.11
UBE3AQ05086 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC8.1□□□□□ -1.11
UBE3AQ05086 AC013403.1-201ENST00000436954 263 ntBASIC8.1□□□□□ -1.11
UBE3AQ05086 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC8.1□□□□□ -1.11
UBE3AQ05086 AL356133.1-201ENST00000444762 372 ntBASIC8.1□□□□□ -1.11
UBE3AQ05086 RPL24P8-201ENST00000446071 474 ntBASIC8.1□□□□□ -1.11
UBE3AQ05086 YAP1P2-201ENST00000455104 610 ntBASIC8.1□□□□□ -1.11
UBE3AQ05086 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE3AQ05086 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE3AQ05086 RN7SL791P-201ENST00000467868 295 ntBASIC8.1□□□□□ -1.11
UBE3AQ05086 RN7SL456P-201ENST00000469290 295 ntBASIC8.1□□□□□ -1.11
UBE3AQ05086 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE3AQ05086 FTH1P23-201ENST00000492727 550 ntBASIC8.1□□□□□ -1.11
UBE3AQ05086 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC8.1□□□□□ -1.11
UBE3AQ05086 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC8.1□□□□□ -1.11
UBE3AQ05086 LDHC-204ENST00000536880 957 ntTSL 5 BASIC8.1□□□□□ -1.11
UBE3AQ05086 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC8.1□□□□□ -1.11
UBE3AQ05086 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC8.1□□□□□ -1.11
UBE3AQ05086 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC8.1□□□□□ -1.11
UBE3AQ05086 AL139317.4-201ENST00000605879 760 ntBASIC8.1□□□□□ -1.11
UBE3AQ05086 AC080112.3-201ENST00000612552 880 ntBASIC8.1□□□□□ -1.11
UBE3AQ05086 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
UBE3AQ05086 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.1□□□□□ -1.11
UBE3AQ05086 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms