Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 OFD1P7Y-201ENST00000454643 1155 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 MTAPP1-201ENST00000489154 819 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC108865.1-201ENST00000507644 496 ntTSL 3 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 RN7SKP14-201ENST00000516000 329 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 NACAP1-202ENST00000519039 641 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC104997.1-201ENST00000519761 717 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 UBC-213ENST00000546120 718 ntTSL 5 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 CCNG2P1-201ENST00000549521 1000 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC023080.1-201ENST00000551663 931 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 APEX1-214ENST00000557054 888 ntTSL 5 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AGGF1P4-201ENST00000568249 801 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC015818.5-201ENST00000578659 356 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 AP006587.6-201ENST00000582128 1091 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 VN1R88P-201ENST00000596787 292 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC079315.1-201ENST00000602952 623 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 STX8P1-201ENST00000603161 355 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 RPL23AP90-201ENST00000603820 236 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 FXYD6P1-201ENST00000604857 285 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC116003.3-201ENST00000612669 541 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 AL137246.2-201ENST00000613439 662 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 U6atac.1-201ENST00000616025 117 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALDH1A1P00352 OIT3-201ENST00000334011 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALDH1A1P00352 LINC00486-201ENST00000414054 1794 ntTSL 4 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALDH1A1P00352 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 LINC00886-201ENST00000472943 3306 ntTSL 2 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 MOGAT2-203ENST00000526712 3204 ntTSL 2 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 CASC19-281ENST00000642118 1554 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALDH1A1P00352 STX12-201ENST00000373943 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALDH1A1P00352 PACRG-203ENST00000366889 1503 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALDH1A1P00352 KARSP3-201ENST00000571212 1504 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 NFYC-203ENST00000372652 2363 ntTSL 2 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALDH1A1P00352 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 RUFY3-204ENST00000502653 2342 ntTSL 2 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 PFKM-225ENST00000551804 2797 ntTSL 5 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 CPA2-201ENST00000222481 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALDH1A1P00352 AL049636.1-201ENST00000455736 1357 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 RSPH4A-203ENST00000368581 2704 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALDH1A1P00352 NOP2-202ENST00000382421 2736 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALDH1A1P00352 LRRC37A11P-201ENST00000425901 3580 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALDH1A1P00352 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALDH1A1P00352 PSMC1P3-201ENST00000453822 1318 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALDH1A1P00352 MEF2C-239ENST00000636294 2576 ntTSL 5 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 MIR595-201ENST00000384905 96 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 SNORD86-201ENST00000391196 86 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 LEUTX-201ENST00000396841 671 ntTSL 2 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALDH1A1P00352 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 GLS-205ENST00000409626 997 ntTSL 2 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 NRIR-202ENST00000414795 506 ntTSL 3 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 CRIP1P3-201ENST00000416794 220 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 AC016877.1-201ENST00000420417 464 ntTSL 3 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALDH1A1P00352 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 UBE2D3P4-201ENST00000441973 436 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALDH1A1P00352 VN1R32P-201ENST00000452234 905 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 AL109809.3-201ENST00000456875 246 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 RN7SL12P-201ENST00000473849 290 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 PA2G4P4-201ENST00000473864 1182 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALDH1A1P00352 RN7SL282P-201ENST00000479676 297 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 MTND5P13-201ENST00000513046 1079 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 NTAN1P2-201ENST00000515730 940 ntBASIC9.66□□□□□ -0.86
ALDH1A1P00352 PTK2-241ENST00000522950 548 ntTSL 4 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 AC090159.1-201ENST00000525309 806 ntTSL 2 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC9.66□□□□□ -0.86
ALDH1A1P00352 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms