Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 GTF2IP1-202ENST00000614592 2047 ntBASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 AL162632.3-201ENST00000566976 1625 ntBASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 SLC2A3P4-201ENST00000521259 1471 ntBASIC8.06□□□□□ -1.12
SYCE2Q6PIF2 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 AC007923.2-201ENST00000584218 1591 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 TRIM60P14-201ENST00000513444 1419 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 NF1P7-201ENST00000612076 1530 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 RNU1-38P-201ENST00000362817 144 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 AC090114.1-201ENST00000393266 448 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 GAS8-AS1-201ENST00000408886 435 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 RNA5SP177-201ENST00000410122 107 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 CYP4F34P-201ENST00000425951 481 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 AC009362.1-201ENST00000427253 406 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 AF274573.1-201ENST00000430535 494 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 AL356133.1-201ENST00000444762 372 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 AC019080.2-201ENST00000453859 394 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 RPL21P42-201ENST00000488408 464 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 RPL7L1P7-201ENST00000509986 724 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 AP005597.1-201ENST00000534192 802 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 AL109628.1-201ENST00000556877 366 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 EEF1A1P22-201ENST00000559385 1380 ntBASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
SYCE2Q6PIF2 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 AL365475.1-201ENST00000565135 1949 ntBASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 U3.14-201ENST00000365363 227 ntBASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 SNORA11.5-201ENST00000408163 128 ntBASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 EIF4A1P2-201ENST00000422633 1220 ntBASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 RPS10P14-201ENST00000440748 502 ntBASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 AC092473.1-201ENST00000441098 221 ntBASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 RN7SL688P-201ENST00000471754 275 ntBASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 AC007688.1-201ENST00000475592 759 ntBASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 AC092349.1-201ENST00000504903 310 ntBASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 7SK.12-201ENST00000612820 244 ntBASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 AL357556.1-201ENST00000421884 1388 ntBASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 AC093844.1-201ENST00000514910 1361 ntBASIC8.04□□□□□ -1.12
SYCE2Q6PIF2 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms