Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC9.56□□□□□ -0.88
COL15A1P39059 AL954705.1-201ENST00000435277 559 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 OSTCP2-201ENST00000437956 444 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 AC027124.1-201ENST00000440852 466 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC9.56□□□□□ -0.88
COL15A1P39059 PPIA-203ENST00000451562 544 ntTSL 2 BASIC9.56□□□□□ -0.88
COL15A1P39059 HNRNPA1P17-201ENST00000496620 924 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 AC092349.1-201ENST00000504903 310 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC9.56□□□□□ -0.88
COL15A1P39059 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC9.56□□□□□ -0.88
COL15A1P39059 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC9.56□□□□□ -0.88
COL15A1P39059 RBMS2P1-201ENST00000525031 1226 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 AP001646.2-201ENST00000528645 1156 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 AC068790.1-201ENST00000536166 355 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 AC233290.1-201ENST00000553021 1186 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC9.56□□□□□ -0.88
COL15A1P39059 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC9.56□□□□□ -0.88
COL15A1P39059 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC9.56□□□□□ -0.88
COL15A1P39059 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
COL15A1P39059 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
COL15A1P39059 AC016930.1-201ENST00000468766 2205 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 EIF4BP5-201ENST00000567338 1795 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
COL15A1P39059 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
COL15A1P39059 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
COL15A1P39059 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
COL15A1P39059 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC9.56□□□□□ -0.88
COL15A1P39059 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
COL15A1P39059 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 RNU1-122P-201ENST00000365538 156 ntBASIC9.55□□□□□ -0.88
COL15A1P39059 NXT2-204ENST00000372107 937 ntTSL 3 BASIC9.55□□□□□ -0.88
COL15A1P39059 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC9.55□□□□□ -0.88
COL15A1P39059 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC9.55□□□□□ -0.88
COL15A1P39059 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC9.55□□□□□ -0.88
COL15A1P39059 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC9.55□□□□□ -0.88
COL15A1P39059 AC117394.1-201ENST00000477323 567 ntBASIC9.55□□□□□ -0.88
COL15A1P39059 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC9.55□□□□□ -0.88
COL15A1P39059 AC096661.1-201ENST00000515870 822 ntBASIC9.55□□□□□ -0.88
COL15A1P39059 AP003084.1-201ENST00000524828 742 ntBASIC9.55□□□□□ -0.88
COL15A1P39059 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC9.55□□□□□ -0.88
COL15A1P39059 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC9.55□□□□□ -0.88
COL15A1P39059 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC9.55□□□□□ -0.88
COL15A1P39059 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC9.55□□□□□ -0.88
COL15A1P39059 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC9.55□□□□□ -0.88
COL15A1P39059 AC091932.1-201ENST00000569381 427 ntBASIC9.55□□□□□ -0.88
COL15A1P39059 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC9.55□□□□□ -0.88
COL15A1P39059 AL451085.1-201ENST00000604546 690 ntBASIC9.55□□□□□ -0.88
COL15A1P39059 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC9.55□□□□□ -0.88
COL15A1P39059 uc_338.37-201ENST00000620113 186 ntBASIC9.55□□□□□ -0.88
COL15A1P39059 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC9.55□□□□□ -0.88
COL15A1P39059 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC9.55□□□□□ -0.88
COL15A1P39059 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC9.55□□□□□ -0.88
COL15A1P39059 AL512353.3-201ENST00000417517 1326 ntBASIC9.55□□□□□ -0.88
COL15A1P39059 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
COL15A1P39059 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
COL15A1P39059 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
COL15A1P39059 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
COL15A1P39059 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC9.55□□□□□ -0.88
COL15A1P39059 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
COL15A1P39059 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC9.54□□□□□ -0.88
COL15A1P39059 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
COL15A1P39059 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
COL15A1P39059 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
COL15A1P39059 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
COL15A1P39059 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
COL15A1P39059 CREM-214ENST00000395887 849 ntTSL 5 BASIC9.54□□□□□ -0.88
COL15A1P39059 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
COL15A1P39059 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC9.54□□□□□ -0.88
COL15A1P39059 AC092570.2-201ENST00000452117 1143 ntBASIC9.54□□□□□ -0.88
COL15A1P39059 ST13P21-201ENST00000453250 1098 ntBASIC9.54□□□□□ -0.88
COL15A1P39059 CREM-224ENST00000468236 582 ntTSL 3 BASIC9.54□□□□□ -0.88
COL15A1P39059 AC015820.1-201ENST00000473882 321 ntBASIC9.54□□□□□ -0.88
COL15A1P39059 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
COL15A1P39059 AC079594.1-201ENST00000489757 331 ntBASIC9.54□□□□□ -0.88
COL15A1P39059 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC9.54□□□□□ -0.88
COL15A1P39059 RPL23AP80-201ENST00000495605 424 ntBASIC9.54□□□□□ -0.88
COL15A1P39059 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC9.54□□□□□ -0.88
COL15A1P39059 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC9.54□□□□□ -0.88
COL15A1P39059 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC9.54□□□□□ -0.88
COL15A1P39059 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC9.54□□□□□ -0.88
COL15A1P39059 GNG2-215ENST00000557376 573 ntTSL 4 BASIC9.54□□□□□ -0.88
COL15A1P39059 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC9.54□□□□□ -0.88
COL15A1P39059 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC9.54□□□□□ -0.88
COL15A1P39059 IGLJCOR18-201ENST00000584002 424 ntBASIC9.54□□□□□ -0.88
COL15A1P39059 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC9.54□□□□□ -0.88
COL15A1P39059 AC005518.2-201ENST00000603254 282 ntBASIC9.54□□□□□ -0.88
COL15A1P39059 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
COL15A1P39059 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms